| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1911 |
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| Symbol | |
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| ID | 4921633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2209370 |
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| End bp | 2210011 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640163479 |
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| Product | hypothetical protein |
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| Protein accession | YP_001094036 |
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| Protein GI | 127512839 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2095] Multiple antibiotic transporter |
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| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0139262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000197593 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGACATTGG ATTTAACACT TTATGTTAAA TTTTTTCTTG GCTTGGTAGC GATAATCAAC
CCCATAGGTT TGCTGCCCGT GTTTGTGAGT CTGACCAGTC ACCAGACAGA AGCGGAGCGT
AACCATACGG GTAAGGTTGC CAACTTTGCC GTGGTGGTGA TCCTGCTTGT GACCATCATC
GCCGGCCAGC ATATCCTCAA CATGTTTAGT ATCTCGCTGT CGGCGTTCAG AATTGCCGGC
GGAACCCTGA TCGCCATCAT CGCCATGTCC ATGCTGCAAG GTAAGCTGGG CGAGGTGAAG
CGTAACCAGG AAGAAGACAG GGAGGCGTCG GGCATGGAGT CGGTTGCCGT AGTGCCTCTG
GCTTTGCCGC TGATGGCCGG CCCTGGCGCC ATCAGCTCGG TGATCGTTTC GGCGGCGCAG
CACAACACCT TTAGCGACCT TATTGGCATG TCGATCACTG TGGTGATCTT CGGCCTCACC
AGCTTCACCC TGTTTCGTAT GGCGCCGGTG ATCTTCAAGT TGCTGGGTAA GACGGGCATT
AACGTGATCA CCCGTCTCAT GGGTCTGCTG ATGCTCTCTA TCGGTATCGA GGTGATGGCG
GCCGGTTTCA AGGGCCTGTT CCCTAGCCTG ATCGGCAGTT AG
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| Protein sequence | MTLDLTLYVK FFLGLVAIIN PIGLLPVFVS LTSHQTEAER NHTGKVANFA VVVILLVTII
AGQHILNMFS ISLSAFRIAG GTLIAIIAMS MLQGKLGEVK RNQEEDREAS GMESVAVVPL
ALPLMAGPGA ISSVIVSAAQ HNTFSDLIGM SITVVIFGLT SFTLFRMAPV IFKLLGKTGI
NVITRLMGLL MLSIGIEVMA AGFKGLFPSL IGS
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