Gene Shew_1881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1881 
Symbol 
ID4921714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2165424 
End bp2165825 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content57% 
IMG OID640163449 
Producthypothetical protein 
Protein accessionYP_001094006 
Protein GI127512809 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.779874 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGAT TCTGCCGTGG GCTATTACTC GTCATCTTGT CGTTCGCCGT TAGTTTGCCA 
CTCCTGGCCG ATGACGGCTT GCTGGGCCAG GTGTTTGAGC AGAAGCAGAG CGGCGTTCAG
ATCCAGGGGG AAGGCGAGGT GATTCGCCTG CTCAGTGATG ATACCAAGGG CAGTCGTCAT
CAGCGCTTCA TCTTGCGCCT AGCCAGTGGT CAGACGCTGC TGGTGGCCCA CAATATCGAT
CTGGCGCCGC GCATTGCCGA TCTTAAGGTC GGTGACAGTG TTGGCTTCTT TGGCGAATAT
GAGTGGAATG CTCGCGGCGG TGTGATCCAC TGGACACACC ATGATCCAAG GGGGCGTCAC
CCGGCGGGTT GGTTAAGCCA TGGCGGCCGC AAATATCAGT AG
 
Protein sequence
MNRFCRGLLL VILSFAVSLP LLADDGLLGQ VFEQKQSGVQ IQGEGEVIRL LSDDTKGSRH 
QRFILRLASG QTLLVAHNID LAPRIADLKV GDSVGFFGEY EWNARGGVIH WTHHDPRGRH
PAGWLSHGGR KYQ