Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1881 |
Symbol | |
ID | 4921714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 2165424 |
End bp | 2165825 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640163449 |
Product | hypothetical protein |
Protein accession | YP_001094006 |
Protein GI | 127512809 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.779874 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATAGAT TCTGCCGTGG GCTATTACTC GTCATCTTGT CGTTCGCCGT TAGTTTGCCA CTCCTGGCCG ATGACGGCTT GCTGGGCCAG GTGTTTGAGC AGAAGCAGAG CGGCGTTCAG ATCCAGGGGG AAGGCGAGGT GATTCGCCTG CTCAGTGATG ATACCAAGGG CAGTCGTCAT CAGCGCTTCA TCTTGCGCCT AGCCAGTGGT CAGACGCTGC TGGTGGCCCA CAATATCGAT CTGGCGCCGC GCATTGCCGA TCTTAAGGTC GGTGACAGTG TTGGCTTCTT TGGCGAATAT GAGTGGAATG CTCGCGGCGG TGTGATCCAC TGGACACACC ATGATCCAAG GGGGCGTCAC CCGGCGGGTT GGTTAAGCCA TGGCGGCCGC AAATATCAGT AG
|
Protein sequence | MNRFCRGLLL VILSFAVSLP LLADDGLLGQ VFEQKQSGVQ IQGEGEVIRL LSDDTKGSRH QRFILRLASG QTLLVAHNID LAPRIADLKV GDSVGFFGEY EWNARGGVIH WTHHDPRGRH PAGWLSHGGR KYQ
|
| |