| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1766 |
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| Symbol | |
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| ID | 4921460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2018888 |
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| End bp | 2019304 |
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| Gene Length | 417 bp |
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| Protein Length | 138 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640163327 |
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| Product | signal transduction protein |
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| Protein accession | YP_001093891 |
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| Protein GI | 127512694 |
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| COG category | [K] Transcription |
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| COG ID | [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAATCGA TGAAAGTCGT TGATTATATG GATCGCCAGC CGGTGTTATT ACAGGCAGAC
ATGACACTGG CGGCCGCGGT CGAGAAGCTG CTCTCACAAA AAAAACTAGG CGCAGCAGTG
GTCGATGCAC AGGGTCATTT GGTGGGGTTT TTGTCGCAAC AAGATTGTTT AGCCGTGATG
CTTAAGAGTA CTTATCACTG CGATCTCACC GCCAACGTGA GTGACTGCAT GCGCACCGAT
GTACTTACCG TCAGCAAGGA TGAGCCCATC ATCAGTTTGG CGGAGCAGAT GCTGCTGCCC
AAGCCTAAGA TCTATCCGGT GATCGACCAG GGCAGGGTGG TCGGCATCAT AGACAGAAAT
GCCGTATTGA GGGCGATCAA CACCTCCATG CAGGAGTGTT ATCTTAAACC TGCCTAA
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| Protein sequence | MESMKVVDYM DRQPVLLQAD MTLAAAVEKL LSQKKLGAAV VDAQGHLVGF LSQQDCLAVM
LKSTYHCDLT ANVSDCMRTD VLTVSKDEPI ISLAEQMLLP KPKIYPVIDQ GRVVGIIDRN
AVLRAINTSM QECYLKPA
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