| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1755 |
|---|
| Symbol | |
|---|
| ID | 4924070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 2006591 |
|---|
| End bp | 2006941 |
|---|
| Gene Length | 351 bp |
|---|
| Protein Length | 116 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640163316 |
|---|
| Product | hydrogenase expression/synthesis, HypA |
|---|
| Protein accession | YP_001093880 |
|---|
| Protein GI | 127512683 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) |
|---|
| TIGRFAM ID | [TIGR00100] hydrogenase nickel insertion protein HypA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGAGT ATTCGATTGT CACCGCCCTA CTGGAACAGT GTGAACAGCA CGCCATCGCC
AATCAGGCGA GCAAAATCAC TAAGGTGGTG ATAAAAATCG GCGTCCTAAG CGGCGTCGAA
CCCGCCCTAC TGGCGACCGC GTTTGAAACC TTCAAGCTGG AGGGGCGCGC CAGAGAGGCG
GAACTTGAGA TTCTACATCA GGAATTGGTG CTCGAGTGCC AGGCTTGCCA AAGCACTCAT
ACCATCAAGG AACGAAGTGT CATTTGTCCT AGTTGTCACA GCTATGAGAC CCGCATCATC
GAAGGGGAAG AATTGCTGCT GATGCAACTA GAGCTGGAAA CCGATGAATA A
|
|---|
| Protein sequence | MHEYSIVTAL LEQCEQHAIA NQASKITKVV IKIGVLSGVE PALLATAFET FKLEGRAREA
ELEILHQELV LECQACQSTH TIKERSVICP SCHSYETRII EGEELLLMQL ELETDE
|
|---|
| |