| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1728 |
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| Symbol | |
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| ID | 4923468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1980974 |
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| End bp | 1981393 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640163290 |
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| Product | curli production assembly/transport component CsgF precursor |
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| Protein accession | YP_001093854 |
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| Protein GI | 127512657 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.6125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCAAG CTAAGTCTTT TCGACCGATA GCCCTGCTAT TGGCGGCTAC GTTCAGCCTG
AGCTCTCAGG CGACACAGCT TATCTATACC CCAGTGAACC CCAATTTTGG TGGCAGTTAT
CTTAATGGCT CCTACCTGCT GGCGAACGCC TCGGCGCAGA ACGATCATAA GGGCGGCTCA
GGTTATACGC CCCCCAGTGC CCTCGAGCGC ATGGCAAGTT CCCTTGAGTC TCGTCTGATG
AGCCAACTCT TTAACGATGC GGCCAATGGC GGTGAGGGCT ATCTCAAGAC CACGGACTTC
GAGATCCAAG TGGTCAACGA AGATGGCATG CTATTGGTGC ATATCACCGA TCTATTGACC
GGCGAAACGA CGGTGATCGA AGTTGGTGGG TTGAGCGACA GTTCGAGTGT GGGTGGTTAA
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| Protein sequence | MNQAKSFRPI ALLLAATFSL SSQATQLIYT PVNPNFGGSY LNGSYLLANA SAQNDHKGGS
GYTPPSALER MASSLESRLM SQLFNDAANG GEGYLKTTDF EIQVVNEDGM LLVHITDLLT
GETTVIEVGG LSDSSSVGG
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