Gene Shew_1693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1693 
Symbol 
ID4920617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1946595 
End bp1947542 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content40% 
IMG OID640163255 
Producthypothetical protein 
Protein accessionYP_001093819 
Protein GI127512622 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.388652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACAC AAACTGAAAG ACTAGGAGTA TCCAAGCTAG ATCACTACTT TTCTTCTCAT 
GGATGGCTTT TCAGAGAGCA AATGGTACAT GATTATGGAA TAGATGCTCA TGTCGAGACT
ACAAACGAGA ATTACCCTAC GGGCCAGCTA ATTGCGATAC AGATAAAGTC TGGAATGAGC
TTTTTCTCAG AAGAAAATGA AAACTCATAT ATTTTTAGAA CAGAAGATAA ACATATCGAA
TATTGGTCTA ATCACACGCT CCCAGTAATT TTAGTTTTAT ACAACACTGA TGATGACATT
TTGTATTGGC AAGATGTAAA TGAAGATACT GTTATATCCA CTGGCAAAGG GTGGAAAATT
GAAGTTCCTA AAACTCATGT TCTGGATGAT CGAAGCCTAA TAGCCTTTAG TAAACTTACT
CAGCCCGAAC CATATATACA GAAACTTAAT AAGTTAAAAC TAGATCGCTA TTGGATGGAG
AAGATAACCA AAGGCTATGA AGTTTTTGTA GAGTTTGATG ACTGGATAAA TAAGTCGCTG
AGCAGGTACC AAATCAGACT TAGCTGTGAG GATGAAAGCC AGCATTGGCC AATGACCTAT
TGTCCAGGCA TGTCGATTGA AGAGGCTCTC GAATTTTTCC TACCTTGGGC AGATTTTCGA
ATGGATATCG AGGCCCATCG TGAAGGCAGT ATTGGGCAAT GGGATGCCGA GTGCTATATG
ACTTACGACA AGGAAGAAGG AAGAGCAATA CATGGTATGT CATTTGACGA ATGGTACAAC
GAACCTGAGG GTATAGTTCC ATATCAGGAA GACGGTGAAA TAGCCTCTTA CCGAATACAG
TTAGAGCTAA ACGAACTTGG TAGGTCATTC ATGGAAATCG ACGGCTTTCT ATCCGAAAAA
AGCAAATTCC AAGGGAAAAC ATTCACTACA GATGATTTGC AGTGGTAA
 
Protein sequence
MQTQTERLGV SKLDHYFSSH GWLFREQMVH DYGIDAHVET TNENYPTGQL IAIQIKSGMS 
FFSEENENSY IFRTEDKHIE YWSNHTLPVI LVLYNTDDDI LYWQDVNEDT VISTGKGWKI
EVPKTHVLDD RSLIAFSKLT QPEPYIQKLN KLKLDRYWME KITKGYEVFV EFDDWINKSL
SRYQIRLSCE DESQHWPMTY CPGMSIEEAL EFFLPWADFR MDIEAHREGS IGQWDAECYM
TYDKEEGRAI HGMSFDEWYN EPEGIVPYQE DGEIASYRIQ LELNELGRSF MEIDGFLSEK
SKFQGKTFTT DDLQW