Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1693 |
Symbol | |
ID | 4920617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1946595 |
End bp | 1947542 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640163255 |
Product | hypothetical protein |
Protein accession | YP_001093819 |
Protein GI | 127512622 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.388652 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGACAC AAACTGAAAG ACTAGGAGTA TCCAAGCTAG ATCACTACTT TTCTTCTCAT GGATGGCTTT TCAGAGAGCA AATGGTACAT GATTATGGAA TAGATGCTCA TGTCGAGACT ACAAACGAGA ATTACCCTAC GGGCCAGCTA ATTGCGATAC AGATAAAGTC TGGAATGAGC TTTTTCTCAG AAGAAAATGA AAACTCATAT ATTTTTAGAA CAGAAGATAA ACATATCGAA TATTGGTCTA ATCACACGCT CCCAGTAATT TTAGTTTTAT ACAACACTGA TGATGACATT TTGTATTGGC AAGATGTAAA TGAAGATACT GTTATATCCA CTGGCAAAGG GTGGAAAATT GAAGTTCCTA AAACTCATGT TCTGGATGAT CGAAGCCTAA TAGCCTTTAG TAAACTTACT CAGCCCGAAC CATATATACA GAAACTTAAT AAGTTAAAAC TAGATCGCTA TTGGATGGAG AAGATAACCA AAGGCTATGA AGTTTTTGTA GAGTTTGATG ACTGGATAAA TAAGTCGCTG AGCAGGTACC AAATCAGACT TAGCTGTGAG GATGAAAGCC AGCATTGGCC AATGACCTAT TGTCCAGGCA TGTCGATTGA AGAGGCTCTC GAATTTTTCC TACCTTGGGC AGATTTTCGA ATGGATATCG AGGCCCATCG TGAAGGCAGT ATTGGGCAAT GGGATGCCGA GTGCTATATG ACTTACGACA AGGAAGAAGG AAGAGCAATA CATGGTATGT CATTTGACGA ATGGTACAAC GAACCTGAGG GTATAGTTCC ATATCAGGAA GACGGTGAAA TAGCCTCTTA CCGAATACAG TTAGAGCTAA ACGAACTTGG TAGGTCATTC ATGGAAATCG ACGGCTTTCT ATCCGAAAAA AGCAAATTCC AAGGGAAAAC ATTCACTACA GATGATTTGC AGTGGTAA
|
Protein sequence | MQTQTERLGV SKLDHYFSSH GWLFREQMVH DYGIDAHVET TNENYPTGQL IAIQIKSGMS FFSEENENSY IFRTEDKHIE YWSNHTLPVI LVLYNTDDDI LYWQDVNEDT VISTGKGWKI EVPKTHVLDD RSLIAFSKLT QPEPYIQKLN KLKLDRYWME KITKGYEVFV EFDDWINKSL SRYQIRLSCE DESQHWPMTY CPGMSIEEAL EFFLPWADFR MDIEAHREGS IGQWDAECYM TYDKEEGRAI HGMSFDEWYN EPEGIVPYQE DGEIASYRIQ LELNELGRSF MEIDGFLSEK SKFQGKTFTT DDLQW
|
| |