| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1639 |
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| Symbol | lpxK |
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| ID | 4923233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1876708 |
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| End bp | 1877724 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640163201 |
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| Product | tetraacyldisaccharide 4'-kinase |
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| Protein accession | YP_001093765 |
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| Protein GI | 127512568 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1663] Tetraacyldisaccharide-1-P 4'-kinase |
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| TIGRFAM ID | [TIGR00682] tetraacyldisaccharide 4'-kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCGT TGGTTAATCG TCTCTGGTAT GACAGGCAGG CCGGTGTTCA CTGGCTGCTT
GTACTGTTGC TTCTGCCTCT AAGTGGCTTG TTTTATCTGC TGACGAGTCT CAGGCGACAG
CTGTTTCGTT TGGGGCTTAA GGCAAGCGCG CGGCTCGATG TGCCTGTGAT TGTGGTGGGC
AACATCACGG TCGGTGGCAG CGGCAAGACC CCCACGGTTA TCTATCTCAT CGAACTGCTT
CGCCGTAATG GCTATCGCCC TGGGGTGATC AGCCGCGGCT ACGGCGTCGA GTTTTCCGGC
TGTAAGCGGG TTATTGCTGG CATGCCAGCC AATGAAGTAG GTGATGAACC GGCCATGATA
GTGGCGCGCA CCCAGGTGCC TATGGTGATA GGTAGCGATC GCGTGGCGGC GGGTAAGGCC
CTGATGGATT GGCAGGCGGT GGATGTGATC ATCAGCGACG ATGGCTTGCA GCACTATCGC
CTTAAACGGG ATATCGAGAT CTTAGTACTT GATGGCAAAC GCCGCTTCGG CAATGGTCTG
CTGTTGCCTG CCGGACCATT GAGAGAAGGG CGCTGGCGTC AAGGCCGCGT CGACTTTACC
TTGGTCAACG GCGAGGGTAG TGGACCCGAA GAGTTTGAGA TGGCGCTGGC GCCTGGCAAT
TGGCGCAGCG TGGCAGATGG CCAGGTAGTT ACAGCTAATG TGGACAAGAG TCATGAGAGT
GTGGCTATCG CCGGCATAGG CAATCCACAG CGATTCTTCG ATACCCTTAG TGAGATTGGG
GTTCAACCAA GTGGTCAACA TGCCTTTGAC GATCATCAGG CTTACAGTCT CGAGGCTATA
GAGACGGTTG CGGCGGGTCG GGGCGTGCTA ATGACAGAGA AAGATGCGGT TAAATGTCGC
GAATTTGCAA AGTCTAACTG GTGGTATTTG CCTGTAGATG CCAAGATAGC ACCAGAATTT
GAACAGCAAT TGTTAACGCT GCTAAAGCGG CGCGAAAACG TACAACAAGG AAATTAA
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| Protein sequence | MQALVNRLWY DRQAGVHWLL VLLLLPLSGL FYLLTSLRRQ LFRLGLKASA RLDVPVIVVG
NITVGGSGKT PTVIYLIELL RRNGYRPGVI SRGYGVEFSG CKRVIAGMPA NEVGDEPAMI
VARTQVPMVI GSDRVAAGKA LMDWQAVDVI ISDDGLQHYR LKRDIEILVL DGKRRFGNGL
LLPAGPLREG RWRQGRVDFT LVNGEGSGPE EFEMALAPGN WRSVADGQVV TANVDKSHES
VAIAGIGNPQ RFFDTLSEIG VQPSGQHAFD DHQAYSLEAI ETVAAGRGVL MTEKDAVKCR
EFAKSNWWYL PVDAKIAPEF EQQLLTLLKR RENVQQGN
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