| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1627 |
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| Symbol | |
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| ID | 4922414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1860554 |
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| End bp | 1861096 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640163189 |
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| Product | hypothetical protein |
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| Protein accession | YP_001093753 |
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| Protein GI | 127512556 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3150] Predicted esterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000924391 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.186435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTCT ATTTCCACGG TTTTGACGCC ACCAGTCCAG GTAACCATGA AAAAATGCGC
CAGCTGCAGT TTGTCGACCC CGACGTACGG CTGATCAGCT ACAGCACGCT TCACCCTAAG
TACGATATGC AGTATCTGCT CAACGAGGTG AGTCGTCAGC TAACCCAGAG TGACGATCCC
GCGCCCCTGG CGATAGGTGT CGGCCTCGGC GGCTATTGGG CCGAGCGGAT AGGTTTTCTC
AATGGCCTTA AAACCGTGAT GATCAATCCT AATCTGCATC CGGAAGACAA TATGCTCGGC
AAGATAGACA GACCGGAAGA GTATGCCGAT ATTGCCAGCA AGTGTGTCAG CCAGTTTAGG
GAGAAACATA AGGGGCGGGG CATGTGTATC CTATCTCGCC AGGACGAGGT GCATGACAAT
CAGGCGGTGG CCAGCATCTT AGCGCCTTTC TATCCCATCG TCTGGGACGA GGAGCAGCGC
CATAAGTTTC CCTCGCTGGC CGCACATCTC GCCGAGATAA AGGCCTTTAA AGAGCAGCAG
TAA
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| Protein sequence | MILYFHGFDA TSPGNHEKMR QLQFVDPDVR LISYSTLHPK YDMQYLLNEV SRQLTQSDDP
APLAIGVGLG GYWAERIGFL NGLKTVMINP NLHPEDNMLG KIDRPEEYAD IASKCVSQFR
EKHKGRGMCI LSRQDEVHDN QAVASILAPF YPIVWDEEQR HKFPSLAAHL AEIKAFKEQQ
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