| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1626 |
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| Symbol | |
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| ID | 4922156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1859477 |
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| End bp | 1860478 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640163188 |
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| Product | beta-hexosaminidase |
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| Protein accession | YP_001093752 |
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| Protein GI | 127512555 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000974733 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.195617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGATT TGTTATCCAC CGAGATGAAT GCGCAGGAGC AAGCGCAGTT GATGCATCCC
ATGGTCGGCG GGCTGATATT GTTTTCCCGC AACTATCAAG ATCGCGATCA GCTCTGCGCC
TTGGTGGCCT CGGTGCGTGC CCTTAGACCC GATCTGCTTA TCGCCGTGGA TCATGAAGGC
GGGCGGGTAC AAAGATTTAT CGACGGCTTT AGTAAGATCC CCGCCATGGG CGACATATTG
CCAGCGGCAA AGCAAGACCT TCAATTAGCC AAGGGCTGGG CGAGGGAGCT TGGTTTTCTC
ATGGCCGTTG AATTGCTGGC CTGTGATATC GATTTAAGTT TTGCCCCTGT GCTGGATCTG
AACGGCATCA GTCAGGTGAT TGGCACCCGC GCCTTTAGCG ATAAGCCCGA TGAGGTGATA
GCCCTGGCCG AAGCCTTTAT TCAAGGGATG CAGGATGCTG GCATGGCCGC CGTGGGTAAA
CATTTCCCCG GTCATGGCAG CGTGGCGGCT GACTCCCATA TTGCCAAGCC GGTGGATGAG
CGTAGCGAAG CCGAGATCCG CGCCCTGGAC ATGGTGCCCT TTGCGCATCT TATGGGGGCG
AAGCGATTAC AAGGGGTGAT GCCGGCCCAC GTGATCTATC CTAAGGTCGA CCCCAATCCC
GCGGGTTTCT CCTCCTATTG GCTTAAGCAG GTGCTGCGTG AAGAGCTTAA GTTCGATGGG
GTGATCTTCT CCGACGATCT CGGCATGAAG GGGGCTGGCG TGGTGGGTGG CTACCCAGAG
CGGGCCAGCG CCGCTATTAA GGCGGGCTGT GACATGATCT TGCTGTGTAA TGACAGTCAG
GGCGTCAGCG AGCTGTTAAC CTCGTTTGAG TGGCCTGAGC AAGGTCCACA GGTGCCGGCG
CGTAAACTGC TGGCCAACAG ACCTCAGGTT GCCAAGGCGC TGGAGGATGA ATCTCGTTAT
CTGGCGGCAA GAAGGATAGC AGAGCAGATC TGTATGGGCT AA
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| Protein sequence | MMDLLSTEMN AQEQAQLMHP MVGGLILFSR NYQDRDQLCA LVASVRALRP DLLIAVDHEG
GRVQRFIDGF SKIPAMGDIL PAAKQDLQLA KGWARELGFL MAVELLACDI DLSFAPVLDL
NGISQVIGTR AFSDKPDEVI ALAEAFIQGM QDAGMAAVGK HFPGHGSVAA DSHIAKPVDE
RSEAEIRALD MVPFAHLMGA KRLQGVMPAH VIYPKVDPNP AGFSSYWLKQ VLREELKFDG
VIFSDDLGMK GAGVVGGYPE RASAAIKAGC DMILLCNDSQ GVSELLTSFE WPEQGPQVPA
RKLLANRPQV AKALEDESRY LAARRIAEQI CMG
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