| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1518 |
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| Symbol | |
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| ID | 4921091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1740943 |
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| End bp | 1741689 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640163073 |
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| Product | hypothetical protein |
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| Protein accession | YP_001093644 |
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| Protein GI | 127512447 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0597975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.67019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGAATCT CTCTAGCCTT TATCTCTTGC CTGATGTTAG CGGCGCCGCT TCGCGCCGAG
ACTGTGCTCT CCTATGACGT CAACGGATCT AGCAGTTGGT ACCCTTACTT TATTCCCGAG
ACCACCAAAG ACCCAGGGAT CCTGGCCGAG TTGGTGCCGC AGATCTTCGC CTTAACCCCA
GTGAGGTTAG ATGCAAAACA TTATCCGCCT AAGCGGACCA ATCAAGCATT GGCAACCGGC
GGACTGGATT TTGATGTGGT CAGCCCCAGC TGGTTCGAGG GAGGGGATCT TGGCGATGCC
TTCGTGCAGT CTCAGCCTAT TTTTGCCATA AAGGAGCATG TGGTGGTGCT GGCCGGTAAC
CAGGAGCAGT GGATGGATAT CAACACGATC CGCGGCCAGG AGATAGGCAC GGTGCGTGGC
TACCTCTACC ATGATGACAG TGAATATACG CGTATCGATT TCAAGTCTGA ACGTGAGCTG
ATCATCGCCT TGCAGAAGGG GCGAATTCAG GCGGCCATTG CAGGCGATCT TACCGCGTTA
TATTGGGCCA AGGAGCTGGA GGTACCCATC GCTCTGGCGG CGGTGCATTC CGATGGCGTG
TTGGTGATCC GCATGCGCAA GGAACATCAG GCCTTACTTG GACAGATTAA CGATGCGATC
AGCCAGCTAA GATCCCAGGG CGTCATAGAT GCGCTTCTGG CTAAATATAC CTCGGGGCAG
TCTGTCGCCA GCCGATTGAG TAAATAA
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| Protein sequence | MRISLAFISC LMLAAPLRAE TVLSYDVNGS SSWYPYFIPE TTKDPGILAE LVPQIFALTP
VRLDAKHYPP KRTNQALATG GLDFDVVSPS WFEGGDLGDA FVQSQPIFAI KEHVVVLAGN
QEQWMDINTI RGQEIGTVRG YLYHDDSEYT RIDFKSEREL IIALQKGRIQ AAIAGDLTAL
YWAKELEVPI ALAAVHSDGV LVIRMRKEHQ ALLGQINDAI SQLRSQGVID ALLAKYTSGQ
SVASRLSK
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