| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1512 |
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| Symbol | purN |
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| ID | 4924074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1735092 |
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| End bp | 1735736 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640163067 |
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| Product | phosphoribosylglycinamide formyltransferase |
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| Protein accession | YP_001093638 |
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| Protein GI | 127512441 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN |
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| TIGRFAM ID | [TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000374503 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.459598 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCAACT GCTGTCGCGT TCTCGTCCTG GTCTCTGGTA ATGGCAGCAA TCTACAAGCC
ATCATCGACG GTTGTGACGA TAACCTGGAC GCCGAAGTCG TTGGGGTGAT CAGCAATAAG
CCCAATGCCT ATGGCCTGGT GCGCGCGCAT CAGAGTGAGA TCGATACCAG CTGCGTGATC
CCCCATGAGG GCGAGTCTCG CAGCGACTAT GATCTGCGAC TCAAGGCGGC CATCGACAAG
TACCAGCCAG ATCTTATCGT GCTGGCGGGC TTTATGCGTA TCCTGAGCGA CGATTTCGTC
AAGCAGTTCG AGGGACGAAT GATCAACATT CATCCTTCGC TGCTGCCGAA ATACACAGGC
CTGCATACCC ATCAGCGGGC GATCGACGCC GGTGACAGCG AGCATGGCGC CAGCGTCCAC
TTCGTGACCC CAGAGCTGGA TGCCGGCCCA GTGATCCTGC AGGCCAAGGT GCCCGTCTAT
CCCGAGGATG ATGCCAGCGT GCTGGCAGAA AGGGTCCATG AGCAGGAACA CGCCATCTAT
CCCCTGGTTG TAAAGTGGTT CAGCCAGCAA CGCCTGCGTA TGACAGACGG CAAGGCCTAC
CTTGACGATC AACTGTTAAG CCCCATGGGC TACGCCGCCG ACTGA
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| Protein sequence | MSNCCRVLVL VSGNGSNLQA IIDGCDDNLD AEVVGVISNK PNAYGLVRAH QSEIDTSCVI
PHEGESRSDY DLRLKAAIDK YQPDLIVLAG FMRILSDDFV KQFEGRMINI HPSLLPKYTG
LHTHQRAIDA GDSEHGASVH FVTPELDAGP VILQAKVPVY PEDDASVLAE RVHEQEHAIY
PLVVKWFSQQ RLRMTDGKAY LDDQLLSPMG YAAD
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