| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1510 |
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| Symbol | |
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| ID | 4920667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1732190 |
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| End bp | 1733851 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640163065 |
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| Product | peptidase M28 |
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| Protein accession | YP_001093636 |
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| Protein GI | 127512439 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2234] Predicted aminopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0562258 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.317169 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTTG CCCTACCCAC CTGTGCTCTG GTGCTCCTCA GCGCCTGCAG CCAGCATGCT
CCCCAGCTAA GTAGCGAAGA GCAAGTTCCC GCCTTCAACG AAGCCAGATT CAGGCTGGAT
ATTCAGACCC TCTCCTCAGA TAAATTTGAG GGCCGCGCCC CCACGACCCA AGGTGAGGCG
CTGACGCTGG ATTATCTCAG CAAGGCCTTT GCCGCCGCCG GACTGGTCGG TGCCAACGAT
GGCAGCTTCC TGCAGCCTGT GCCTATGGTC AGCTATACCG CCAGCGAATC ACAAACCGTG
ACCCTTGGCG ATCTGCCGAT GCACTATCGT CAGGATATCG TCCTGGGCAG TCGCCACGAC
AACCAAGGGG TGGAGATTAA AGATGCGCCG CTGGTCTTCG TGGGCTATGG CATCAAGGCG
CCGGAATATC ATTGGGACGA CTATCAAGGC CTGGATATGA AGGGCAAGAT CGCCCTGATC
CTGGTGAACG ACCCCGGCTT TGCCCTGCCC GAGTCGGGCA AGTTTAATGG CAAGGCGATG
ACCTACTACG GCCGCTGGAG CTATAAGTTT GAGGAGGCTA GCCGCCAGGG TGCGCTCGGC
GCCATCATCA TCCACGATAC CAAGCCCGCC TCCTATCCTT GGTCTGTGGT AGAAAACAGC
TGGACAGGGG CTCAGCAAGA TCTGGTACTG GATAAGGCCA CGCAAGACAG CCGCGTACAG
GTCGAAGGCT GGATCACCAA GGAGAAAGCC AGCGAGTTGT TCGACAGCGC TGGCTTGTCG
CTGGCGACCT TAAGCGATCG CGCCGCCAGC AGCCCGGTGA ATGTCGCACT GCAAAAATCC
GCCAGCATCG CCTTCGCCAA CAAGGCAGAA TATGCCGATA GCTACAACGT GGTCGCCACC
CTCCCCGGCC AAGGCGCAAG TGACGAGCAG ATCCTCTTTA CCGCCCACTG GGACCATATC
GGCCTGGACA CCAGCAAGCA GGGCGATCAG ATCTATAACG GCGCCCTGGA CAACGCCTCT
GGCACAGCAG GGATCCTGGA GATTGCCCGC CAGTTTGCCA CCCAGGCCAA GCAAGGTAAG
CCGCTTAAGC GTTCGCTCAC CTTCGTCGCC ACCACAGGCG AAGAGCAAGG ATTGTTAGGT
TCGCGCTACT ACGCCGCCAA CCCTGTCTAT CCTTTGGACA AGACAGTGGC CGTCTTCAAC
CTGGACAGCA CCAATATCTA TGGCCGTACA TCGGATTACA CTATCGTAGG CAAAGGTAAG
TCACAACTGG AAACCTATCT GGTCGAGGCG GCCAGCGGCC AGCAGCGCAC CGCGGTGAGT
GAGACACGTC CTGAATCTGG CGGCTTCTTC CGCTCAGACC ACTTCAGCTT CGCCAAGTAT
GGTGTGCCTG CGGTATTTGC CGGTGGCGGC AACAACCCCG TCGATGACGC CACGGCCAAA
TACAAGGCCG AGATGAAAGC GCAGATGAAG GGCTGTTACC ACAATGTCTG CGACGAATAT
CGCGCCGACT GGGATCTCTC CGGCGCCCTG GAAGACCTTG GAGTCTACTA TCAGGCCGCT
CAACGCCTGG GTAACAACGG TGACTGGCCC GGCTATTATG CCGGCACCGA ATTCCACCAA
CTGCGCCCGG CAACCACAAA AGAGACCACT ACCGCCGAGT AA
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| Protein sequence | MRFALPTCAL VLLSACSQHA PQLSSEEQVP AFNEARFRLD IQTLSSDKFE GRAPTTQGEA
LTLDYLSKAF AAAGLVGAND GSFLQPVPMV SYTASESQTV TLGDLPMHYR QDIVLGSRHD
NQGVEIKDAP LVFVGYGIKA PEYHWDDYQG LDMKGKIALI LVNDPGFALP ESGKFNGKAM
TYYGRWSYKF EEASRQGALG AIIIHDTKPA SYPWSVVENS WTGAQQDLVL DKATQDSRVQ
VEGWITKEKA SELFDSAGLS LATLSDRAAS SPVNVALQKS ASIAFANKAE YADSYNVVAT
LPGQGASDEQ ILFTAHWDHI GLDTSKQGDQ IYNGALDNAS GTAGILEIAR QFATQAKQGK
PLKRSLTFVA TTGEEQGLLG SRYYAANPVY PLDKTVAVFN LDSTNIYGRT SDYTIVGKGK
SQLETYLVEA ASGQQRTAVS ETRPESGGFF RSDHFSFAKY GVPAVFAGGG NNPVDDATAK
YKAEMKAQMK GCYHNVCDEY RADWDLSGAL EDLGVYYQAA QRLGNNGDWP GYYAGTEFHQ
LRPATTKETT TAE
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