| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1497 |
|---|
| Symbol | |
|---|
| ID | 4922356 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 1719558 |
|---|
| End bp | 1720292 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640163052 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001093623 |
|---|
| Protein GI | 127512426 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.767246 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGCCT TGTTAAGCCT GTTTCGTTCA TTACTCGGCA GTTTTCGGGA TCTGGTACCC
ATCATCTGTG TGGTTGCCTT CTTCGAGATC TTCGTGTTGC ATCAGGCCCC GGCTAATCTG
GCCGAGATCC TGCTCGGGCT GGTGTTTATC GTCTTTGGTT TGACCTTCTT TGTCTTTGGG
CTCGAGATGG GCCTGTTTCC CATAGGTGAA TCTCTAGCCC AGGCGCTGGC GCGTAAGGGC
AGCGTCTTCT GGTTGGTTGT CTTCTCCTTC TCCCTGGGCT TTGGCACTAC TTTGGCGGAG
CCCGCGCTGA CGGCGGTGGC CAACGAGGCG GCCGAGGTCG CGGCGAACTC CGGGGCCATT
GCAGCAAGTC AGGATGCCAT GGATAGCTAT GCCATGGGGC TCAGGCTGAC GGTGGCCATC
TCGGTGGGGC TGGCGATTCT GCTCGGGGTG ATCCGTATCC TCAAGGGCTG GCCCATTCAT
TATCTGATCA TCGGCGGTTA TCTCTGCGTC ATGGTGCTGA CGGCCTTTGC GCCTGAGAAT
ATCATAGGGA TCGCCTATGA CTCTGGCGGC GTGACCACCT CCACCATTAC CGTGCCGCTG
GTGACCGCCT TGGGGGTAGG CTTGGCCAGC GTGATCAAGG GGCGTAATCC TATGTTGGAT
GGCTTTGGCT TGATCGCCTT TGCCAGCCTA ACCCCGATGA TCTTCGTATT ACTCTACGGC
ATGTGGGTAT TGTGA
|
|---|
| Protein sequence | MSALLSLFRS LLGSFRDLVP IICVVAFFEI FVLHQAPANL AEILLGLVFI VFGLTFFVFG
LEMGLFPIGE SLAQALARKG SVFWLVVFSF SLGFGTTLAE PALTAVANEA AEVAANSGAI
AASQDAMDSY AMGLRLTVAI SVGLAILLGV IRILKGWPIH YLIIGGYLCV MVLTAFAPEN
IIGIAYDSGG VTTSTITVPL VTALGVGLAS VIKGRNPMLD GFGLIAFASL TPMIFVLLYG
MWVL
|
|---|
| |