Gene Shew_1494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1494 
Symbol 
ID4921972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1717732 
End bp1718055 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content53% 
IMG OID640163049 
Producthypothetical protein 
Protein accessionYP_001093620 
Protein GI127512423 
COG category[S] Function unknown 
COG ID[COG3097] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCGT TAACCTATGA TGGCAAGATC ACCTTCTTCG AGCGATTCGA AGCCGATATC 
CTCAGCGGAG CGAAAACCAT CACCCTCAGG GATGAGAGCG AGTCGCACTT TCGCGTCGGT
GACCGCTTGT CGGTATCCAC CTTTGAAACC GGGCGACACT TTTGCGATAT TCAGGTGGTG
CGGGTCGAAG AGCTTGCCTT CGAGGCATTA AACTCCCGGC ACGCCGTGCA GGAGAATATG
ACGCTTGAGC AGTTAAAGGC GGTGATCACC GAGATATATG GCGAGATTGA TACCCTCTAT
CTTATCGAGT ATCGTCTGCT CTAG
 
Protein sequence
MTPLTYDGKI TFFERFEADI LSGAKTITLR DESESHFRVG DRLSVSTFET GRHFCDIQVV 
RVEELAFEAL NSRHAVQENM TLEQLKAVIT EIYGEIDTLY LIEYRLL