| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1479 |
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| Symbol | |
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| ID | 4923500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1704077 |
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| End bp | 1705513 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640163034 |
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| Product | deoxyribodipyrimidine photo-lyase |
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| Protein accession | YP_001093605 |
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| Protein GI | 127512408 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCGCAC TCTTGTGGCT GAGACGGGAT TTCCGTCTCC ATGATAATCC CGCCTTGAGT
GAGGCGGTGC GGCTCAGGGT GAAACAGGCG CTCTTTATCG CTACCCCGGC CCAGTGGCAG
CAACATGATA TGGCGCCGAT AAAAGCCGAT CTCATTCGTC GTCACCTCGA GTTGATGGCC
GGTGAGTTAG CTGAGTACGG CATCGAGCTG GTCATCTTGT CTGCCACAGA TTTTAGCGAT
CAGGTGAGGG TGTTATGCGA CTACTGCCGT GACCATGGGG TCAAACTATT GCTGGCCAAC
AGCGAGCCTG AGCTCGATGA GCAGGAGCGC GACAAACAGG TGATGGCGGC GGGGATCGAT
CTGCGCCTGT GGCAAAACGA TACCATCTTG CCGCCGGGCA GCGTGCTCAA CCAGCAGGGG
GAGATGTTTA AGGTCTTTAC CCCCTTTAAG AAGGCCTGGC TCAAGTGTGT GGCGGCGAAG
GGCATAGAGT GTGTGCCGAC GCCGGCCAAA TCGACGCCGG TAAAATCGAT CGGTGATGCT
CAAGCAGCGT CTCAGCTTCC CCAACAGCCA ACACCACAAT CATCAAGCAT CAACCTAGAT
TATCCCCTGG TGGATTCCGG TCGCTGGCCC GACAGTGAGC AGGTGATGGG CCAGCTGCTG
CCCCATTTCT GGCAAGACAA GCTGCTCAAT TATGGCGAGC GGCGCGACTT TCCGGCCATC
AAGGGGACAT CAGGCTTATC GCCTTATCTG GCCATAGGGG CGATTAGCTC GCGTTGGCTG
GCGCTGCAAC TGGTGCAGCG TCATCCCGAG GTGATATACG ACACTCAGCA CGGCGCCTTC
ACCTGGCTCA ACGAGCTGAT CTGGCGGGAT TTCTACAAAC ATCTGCTGTT TCACTATCCA
GAGCTTATCA AGGGCGGGAG CTTTCAGCCC AAGTATGAGT CGCTGCCCTG GCCCAATAAC
GAGGCCCACT TTCAGGCCTG GTGTGAGGGG CGCACCGGCT ACCCCATAGT CGATGCGGCC
ATGAAACAGC TGCGCCGTAC CGGCTGGATG CACAATCGCC TGCGTATGAT AGTGGCGAGT
TTCCTCACCA AGCATCTGCT GGTGGACTGG CACAAGGGCG AGCGCTTCTT CATGCAGCAG
CTGATCGACG GCGATTTCAG TGCCAACAAC GGCGGCTGGC AGTGGGCCGC CAGCACGGGC
TGCGATGCCC AGCCCTATTT TAGGATCTTT AACCCCATCA CCCAGAGCCA AAAGTTTGAT
CCTCGGGGAG AGTTCATCCG TAAATATCTA CCAGAGTTGA GAGAGGTGCC CGACAAGCAG
ATCCACTTCC CCCACGACTA CTTAGCGAGT CAGGGCAAGG CTGAGATCTA CCCTGCGCCG
ATAGTGGACC ATAAGGCGGC GCGCCAAAGG GCCCTGGCAT TTTATAAGGT GGAATAG
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| Protein sequence | MSALLWLRRD FRLHDNPALS EAVRLRVKQA LFIATPAQWQ QHDMAPIKAD LIRRHLELMA
GELAEYGIEL VILSATDFSD QVRVLCDYCR DHGVKLLLAN SEPELDEQER DKQVMAAGID
LRLWQNDTIL PPGSVLNQQG EMFKVFTPFK KAWLKCVAAK GIECVPTPAK STPVKSIGDA
QAASQLPQQP TPQSSSINLD YPLVDSGRWP DSEQVMGQLL PHFWQDKLLN YGERRDFPAI
KGTSGLSPYL AIGAISSRWL ALQLVQRHPE VIYDTQHGAF TWLNELIWRD FYKHLLFHYP
ELIKGGSFQP KYESLPWPNN EAHFQAWCEG RTGYPIVDAA MKQLRRTGWM HNRLRMIVAS
FLTKHLLVDW HKGERFFMQQ LIDGDFSANN GGWQWAASTG CDAQPYFRIF NPITQSQKFD
PRGEFIRKYL PELREVPDKQ IHFPHDYLAS QGKAEIYPAP IVDHKAARQR ALAFYKVE
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