| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1474 |
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| Symbol | |
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| ID | 4922461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1699794 |
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| End bp | 1700657 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640163029 |
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| Product | peptidase M23B |
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| Protein accession | YP_001093600 |
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| Protein GI | 127512403 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00227423 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.920527 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACTTGT TGCGCTTAGT TGTGGCTGTA CTCTGTCTTG GTGGCGCCGT GGGCGCTCAG
GCCGAGGTTA ACTTGAGTGG CAAGATGGAG CAGGGCGCGC TGATCCGCGG CCAGGCTCAG
GCGGGAACCC AGGTATGGCT CAACGGCGAG CCAGTAAAAG TCAGCCCCGA AGGGCTGTTT
GCCTTCGGTT TCGAGCGGGA AGCCACGCTC AATCAAGAGC TTAAACTAAT CTACCCAGAT
GGCCTGACCC AGCTTATGCC CCTCAAGATA AGCGAGAAGC AGTACAAGAT CGACAAGGTC
AACGGCATCG CCAAGAAGAT CATGAAGCCA GATCCTAAGG CCGTAGAGCG CGCGGCCAAA
GACAGCAAGC AGGTCAAGGC GGCCAGAGCC ACCTTCTCGG GGCAGACCGC CTTTGCTCAA
GACTTCATCT GGCCGCTGAC CGGCCGCATC TCGGGCGTGT ATGGCAGCCA GCGGGTCTAT
AACGGCAAGC CGGGCAATCC TCACTATGGC GTGGATGTCG CCGCCAAGAC GGGCACTGTG
GTGGTGGCGC CCGCCGATGG GGTGGTGACC CTCTCAGTAC CCGACATGTT TTATTCTGGC
GGCACTATGG TTATCGATCA CGGCTATGGG GTCAGTTCCA GCTTTTTGCA TCTGAGCAAG
CTGTATGTGA AGCCGGGTGA GATCATTAAA CAGGGCCAGC CGGTTGCCGA GGTGGGCGCC
ACCGGACGCG CCACCGGGCC GCACCTTGAC TGGCGTCTCA ACTGGTTCCA GATGCGACTG
GATCCCGTGA CTGTGGTACC GTCCATGGCG AGCGTGCTTG AGCGTCAAAC CCAGGCCAAA
CAGACCAAAC AGGCCAACAA GTAG
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| Protein sequence | MNLLRLVVAV LCLGGAVGAQ AEVNLSGKME QGALIRGQAQ AGTQVWLNGE PVKVSPEGLF
AFGFEREATL NQELKLIYPD GLTQLMPLKI SEKQYKIDKV NGIAKKIMKP DPKAVERAAK
DSKQVKAARA TFSGQTAFAQ DFIWPLTGRI SGVYGSQRVY NGKPGNPHYG VDVAAKTGTV
VVAPADGVVT LSVPDMFYSG GTMVIDHGYG VSSSFLHLSK LYVKPGEIIK QGQPVAEVGA
TGRATGPHLD WRLNWFQMRL DPVTVVPSMA SVLERQTQAK QTKQANK
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