| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1441 |
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| Symbol | |
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| ID | 4923045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1656060 |
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| End bp | 1657277 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640162980 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001093567 |
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| Protein GI | 127512370 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCA GCCGTCCACT ACAACTTCGT CTGATCTGGG GCCTCTCTCT GGCTTCCGTG
GTGATCTACA TCAACCTGTA TATGGTGCAG GGGATGTTGC CGCTGATCGC GACCAGTTTT
AGCGTGTCGC CGGCCCACGC CACCCTGTTG TTGTCTGTGA CCAGCTTCTC CATGGCCTTC
GCGCTGCTCT TCTATGCCAC ACTGTCTGAC AAGCTAGGCA GGCGTAAGCC GCTGCTCTGG
AGCCTGGCGC TGCTTGTGGT GGCGGATCTC ATGTTGATCT GGGTGCAGGA TTTTTCGGCA
TTGGTGGCGG TGCGCCTGTT TCAGGGGATA CTGCTGGCGG CGGTGCCCGC TATCGCCATG
GCTTATTTTA AGGATCTGCT CGATACCAGC GTGCTACTCA AGGCGGGGGC CATCTATATC
GGCGCCAACA GTCTGGGGGG CATCGCCGGG CGCCTGCTCG GCGGTCTGAT GACAGAGTAT
CTGACCTGGG TAGAGGCCAT GGGGCTGGTG AGTGTCTTGA CCCTTGCTGG CGTGGTGGGC
GTGTTACTGT TATTGCCGCG ACTCGACCGG GTGCGCATCC GTCGCCGTCA ACACAAGAGT
GGTTTTGGCC TCGCCGATCT TAAAGGCTTT GGCCTGCACC TTGGCGATGC CACCCTGGTG
AAGCTCTACC TCTTGGGGGC GCTGGCCTTC ATGGTGATGG TCAATCAATT TAGCTATATC
CAGCTGCACC TGATGCAGGC ACCATTTGGC TGGGGTAAGT TTCAGGTCAC CCTGATCTTC
CTCTGTTATT TGAGTGGTAC CTACGCCTCG TTCCGCTCCG CCAAGTGGGT GACTCGCCTG
GGACGTCAGC CACTGTTTAT CCTGTCGGCG GTGATGATGT GTGTCGGTAG TCTGGTGACC
CTGGGGGATA CCAGCAGCGC CATCGTTATA GGTTTCCTGC TGTCGAGCTT TGGCTTCTTC
ACCTTCCACA GCGTCTGTAA TGCCTGGGTA GCCCAGCGTG CACAACAGCA CAGGGCGAAG
GCCACGGCGC TCTATCTGTG TAGTTACTAT CTGGGGGCGG CGCTGGGCGG GCCTTTCCTC
TTGCCCTTCT GGCAGCATTG GGGCTGGAGC GGCGTGGTGG CTGGCAGCTT GACCCTGCTT
AGCGGCGTGA TCCTATTGGT GGTGATGCTG CAGCGCAACC ATAGGCCACA CACGCCGCTG
TTAGATGCGG CGGGCTAA
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| Protein sequence | MTASRPLQLR LIWGLSLASV VIYINLYMVQ GMLPLIATSF SVSPAHATLL LSVTSFSMAF
ALLFYATLSD KLGRRKPLLW SLALLVVADL MLIWVQDFSA LVAVRLFQGI LLAAVPAIAM
AYFKDLLDTS VLLKAGAIYI GANSLGGIAG RLLGGLMTEY LTWVEAMGLV SVLTLAGVVG
VLLLLPRLDR VRIRRRQHKS GFGLADLKGF GLHLGDATLV KLYLLGALAF MVMVNQFSYI
QLHLMQAPFG WGKFQVTLIF LCYLSGTYAS FRSAKWVTRL GRQPLFILSA VMMCVGSLVT
LGDTSSAIVI GFLLSSFGFF TFHSVCNAWV AQRAQQHRAK ATALYLCSYY LGAALGGPFL
LPFWQHWGWS GVVAGSLTLL SGVILLVVML QRNHRPHTPL LDAAG
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