| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1438 |
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| Symbol | |
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| ID | 4924352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1653215 |
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| End bp | 1654201 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640162977 |
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| Product | fumarylacetoacetate (FAA) hydrolase |
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| Protein accession | YP_001093564 |
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| Protein GI | 127512367 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.879034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTAG CAAGTTATAA CAACGGCCGT CGTGACGGTC AGCTGATGCT TGTGAGTAAA
GATCTAACCA AGGCTGTTGC GGTACCGGCC ATCGCGCACA CCATGCAGCA GCTGCTCGAC
GCCTGGGATC TGCTTCAGCC GCAACTGCAA GAGCTTTATG AGGCCCTCAA CCAAGGCGTG
CTAGACAACA CGGTCGACTT CGACGAGAAC AAGTGCCTGT CACCGCTGCC ACGTGCCTAT
CAGTGGGCGG ACGGTAGCGC CTATGTGAAC CACGTTGAGC TGGTACGTAA GGCCCGTGGC
GCCGAGATGC CAGAAACCTT CTGGACAGAT CCTCTGGTGT ATCAGGGCGG TTCTGACAGC
TTTATCGCGC CTAAGGCGGA TATCGAGCTG GCCAGCGAAG AGTGGGGCAT AGATTTTGAA
TCTGAAGTGG CAGTGATCAC CGACGACGTG CCTATGGGCA TAGACGCAGA GTCGGCCGAG
AAGCATATCA AGCTGCTGAT GCTGGTGAAC GATGTGTCGC TGCGTAACCT GATCCCAGCC
GAGCTGGCCA AGGGCTTCGG TTTCTTCCAG TCTAAGCCGT CCAGCAGCTT CTCACCTGTT
GCCGTGACTC CTGATGAGCT GGGTGACAAG TGGCATGAGT CTAAGGTGCA TCTGCCGTTG
ATCACCCATC TGAACAACGA GCTGTTTGGT AAGCCAAACT GTGGCATCGA CATGACCTTT
AACTTCAGTC AGTTGATTGC CCATTTCACC AAGACTCGCC CGCTGGGCGC CGGCGCCATC
ATAGGTTCGG GCACCATCTC TAACTATGAT CGCAGCGCTG GCTCTAGCTG TCTGGCCGAG
ACCCGTATGC TGGAGACCAT CAGCGACGGT AAGCCATCGA CCTCATTCAT GCGTTTCGGT
GATCGCGTGC GCATCGAGAT GCTGGATGAA AATGAGCAAT CTATCTTTGG TGCCATCGAC
CAGCAGGTGG TTGAGTACAA AGGTTAA
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| Protein sequence | MKLASYNNGR RDGQLMLVSK DLTKAVAVPA IAHTMQQLLD AWDLLQPQLQ ELYEALNQGV
LDNTVDFDEN KCLSPLPRAY QWADGSAYVN HVELVRKARG AEMPETFWTD PLVYQGGSDS
FIAPKADIEL ASEEWGIDFE SEVAVITDDV PMGIDAESAE KHIKLLMLVN DVSLRNLIPA
ELAKGFGFFQ SKPSSSFSPV AVTPDELGDK WHESKVHLPL ITHLNNELFG KPNCGIDMTF
NFSQLIAHFT KTRPLGAGAI IGSGTISNYD RSAGSSCLAE TRMLETISDG KPSTSFMRFG
DRVRIEMLDE NEQSIFGAID QQVVEYKG
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