| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1325 |
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| Symbol | |
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| ID | 4920511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1537721 |
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| End bp | 1538287 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640162865 |
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| Product | acetyltransferase-like protein |
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| Protein accession | YP_001093453 |
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| Protein GI | 127512256 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
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| TIGRFAM ID | [TIGR03585] pseudaminic acid biosynthesis N-acetyl transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCATTAA ACTTTAAGCG TGTAGATGTA AACGATGCCG AGCTGTTGCT TAAGTGGCGT
ACGACTCCGG AAATCACTAA ACACATGTTT ACCGATCTCG AAAATCCGTC GGTAGACAAG
CAGCGGGCTT GGATAGAATC TTTAGCGAAG CGAGATGATT ACCGAGCCTA CATGATACAA
GATGATGGTG TCTCTATTGG CTTCTTATGT TTCTCAGATA TAGACAGATT TCACCAACGT
TGCAGCACAG GTTCCTATAT TTATGAGCGT CAGGCTCGAC TTAAATATGG CGTCACCATG
CACACTTATA TCTGCAACTA CGTGTTTCAC CAACTTAAGC TAAACAAAAT AGTTAACTAT
GTACTCGACG CCAATGAAAA AGTGGTCAAG CTACAAACGT TACACAAGAC CAGGCTTGTC
GGTCACCTTA AACAACATAT CTACAAAAAT GGTGAGTTTT TAGACGTCCA TATCTTTGAA
CAATTGAGGC AAGATTGGCT CAGTCAGAAA CAACATTTTA GCTTGGAAAA AATTTCAGCA
GCCTTTAACG ATTGGAATAA TGCATGA
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| Protein sequence | MALNFKRVDV NDAELLLKWR TTPEITKHMF TDLENPSVDK QRAWIESLAK RDDYRAYMIQ
DDGVSIGFLC FSDIDRFHQR CSTGSYIYER QARLKYGVTM HTYICNYVFH QLKLNKIVNY
VLDANEKVVK LQTLHKTRLV GHLKQHIYKN GEFLDVHIFE QLRQDWLSQK QHFSLEKISA
AFNDWNNA
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