| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1311 |
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| Symbol | |
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| ID | 4920475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1520737 |
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| End bp | 1523808 |
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| Gene Length | 3072 bp |
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| Protein Length | 1023 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640162851 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001093439 |
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| Protein GI | 127512242 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAAAG CCTTAGTCGA AAATGGTCGT CTGGCCAGCC TGGTGATCGC CCTGCTGATC
GTCGCCGGCC TTGGCGCCAT CACCAGCCTG CCCCGCATGG AAGATCCTAG CATCACCAAC
CGCTTCGCCT CTGTGGTGAC CCATTATCCG GGCGCCTCGG CCGAGCGGGT CGAAGCCCTG
GTCACCGAGG TGCTGGAAAA TCAGCTCAGA CGCCTGGAAG AGCTGAAACT GGTGCAGTCC
ACCTCACGCC CGGGGATCTC AGTCATCCAA CTCGAGCTGA AAGACAGGAT CACAGAGACT
GACCCTGTCT GGTCAAGGGC CAGGGATCTG GTCAACGATG CCAAGAACCT GCTCCCCCCC
GCGGCGCAAA ATGCCCTGCT AGATGATCAG CTGGGCTATG CCAACACTGC CATTCTGGGC
CTAGTTTGGC AAGGCGCGGG CGAGCCACGC CAAGATATCC TCAACCGCTA CGCCAAGGAG
CTACAGAGCC AGCTCAGGCT GATCCCTGGC ACAGACTTCG TGAAACTCTA TGGCGCCCCC
ACCGAAGAGA TCTTGGTGCA AATAGACGCC CAGAACGTCA ACCGCATAGG CCTCAGCGCC
GCCGCCATCG CCCAGATCCT GGCCAACGCC GATACAAAAG TCTCGGCAGG CGAGATCACC
AACGACGCCT TTCGCGCCCT GGTAGAGGTC TCAGGCGAGC TGGATTCTGT CACCCGCATC
AGACAGGTGC CACTCAAGGT AGATGAAAAC GGTCAGATCA TACGCCTGGG CGAGGTCGCC
AGCGTGCAGC GCCAGCCCAA GACCCCGGCC GCCAGCATCG CCCTCATAGA GCAGGCCCAG
GGGATCATGG TGTCGGCGCG CATGCTCAAC AACACCCGGG TCGACCTCTG GCTACAGCAA
GTGCATCGCG TGGTCGAGAA GGTGCAAGGG GATCTCTCCT CCAACGTGGA GATCCAGTGG
TTGTTCGATC AAGAAGGCTA TACCACCACC CGCCTGAGTG ACCTGATCGC CAGCCTGCTG
CTGGGTTTCA TCATCATTCT GGTGGTACTG ATGTTGACCC TAGGGCTGCG CAACGCGGTG
ATCGTCTCAC TGTCGCTGCC GCTAACCGCC CTCTTCACCC TAGCCTGCAT GAAGTATGTC
GGCCTGCCGA TTCATCAGAT GTCGGTGACC GGCCTGGTAG TGGCGCTGGG GATCATGGTG
GATAACGCCA TCGTCATCGT CGATGCCATC GCCCAGCGTC GCCGTCAGGG GCTGGATCGC
CTAAGCGCCG TCGGCGAGAC CCTCAAACAT CTCTGGCTGC CACTGGCAGG CTCCACCATC
ACCACCATGC TGGCCTTCAC CCCCATCATC CTCATGCCGG GGGCCGCGGG AGAATTTGTC
GGCGGTATCG CTATCTCGGT GATCTTCGCC CTACTGGGCT CCTACCTCAT CTCCCATACG
CTGATCGCCG GGTTCGCGGG CCGCTTCGGC GCCGAGGGCG ACGCCACTCA CTGGTATCAG
CGTGGGGTCA ACTTCCCCAT CATCGCCCGC GCCTTTAGCA AAACCCTGCA TATCGCCCTC
AAGCGTCCCT TACTGGCCGG CGTGGTGATA GGCATATTGC CCATAACTGG CTTTATCGCC
TCGGGGCAGA TGACGGAGCA ATTCTTCCCG CCGTCAGACA GGGACATGTT CCAGATAGAG
GTGCACCTGG CGCCCCAGTC CAGCATAGAA AACACCCGCG CCTTGGTGGA GCGTATCGAT
GCCAAGCTCA GGGCCACGGG CGAGATGCAG AGGCTCGACT GGGTGATTGG CGGCAATGCG
CCCTCCTTCT ACTACAACTT GCTGCAGCGT CAGCAGGGGG CGGCTAACTA CGCCCAGGCG
ATGATCAAAG TTGCCGACTT CGAGCGTGCC AACCAGCTGA TCCCAAGATT GCAGACACAG
CTCGATGCCG AGTTCCCCGA GGCGCAGATC CTGGTGCGTA AGCTAGAGCA GGGCCCGCCG
TTCAATGCCC CCGTTGAGCT GCGCATCTAC GGCCACAACT TAGATACTTT AAGGGAGATT
GGCGATGAGG TGCGGCGTAT TCTGATCACC ACAGATCACG TGCTGCACAC CCGCGCCACC
CTGAGCGCCG GCGCGCCTAA GGTATGGTTT CAGGTAAACG AAGACGCCAG CAAGATGAGC
GGCCTGAGCC TGACGGATAT TGCCAACCAG ATCCAGATGG CCACTACCGG CATCAACGGC
GGCAGTATAC TGGAACAGAC GGAGTCGCTA CCGATCCGGG TACGCACCCA AGATCTGATG
CGCGAGCAGC AGACCGAGCT GTCTCAGATC AACCTGCTGT CAAGCAACGG CGTCGGCATC
CCGCTCTCGG CGCTGGCCAG CAGCCGTATC GATGTCAGCC TGGGCGCCAT CCCCAGACGT
GACGGCCAGC GAGTCAACAC CATAGAGGCC TACCTGGAGA GCGACGTGCT GCCCCAGCAG
GTGCTCAACC AAGCCAAGAC GCGCATCGAC GCCCTCACCC TACCCGCCGG TTATCGTATC
GAGGTGGGCG GCGAGAGCGC CAAGCGTAAC GAGGCCGTGG GTAACCTGCT GTCCAACATA
GTCTTGGTGA TCACTTTGCT GCTGGCGACC GTGGTGCTGT CGTTCAACTC CTTCCGCCTG
ACCGGCATCA TACTGCTGAG CGCGGTTCAG TCGGCAGGCC TTGGCCTACT CGCCGTCTAC
CTGTTTAACT ATCCCTTCGG TTTTACGGTG ATCATCGGCC TGCTGGGCCT GATGGGTCTA
GCGATCAACG CCGCCATCGT GATCCTTGCC GAGCTTGAGG ATATGCCAGA CAGGCGAGAG
GCGAGTATCG ATGCCATAGT CCAAGTGGTC AGCAGCTGCG GTCGTCATAT CGGCTCCACC
ACCATCACCA CCATAGGCGG CTTCCTGCCG CTGATCATCG CAGGTGGCGG CTTCTGGCCA
CCGTTTGCCA TCGCCATCGC TGGCGGTACG GCGCTCACCA CACTGTTGTC ACTGGTCTGG
GTGCCGACCA TGTACCAGCT GCTGATGACC AAGCGCCAGG CGGCGCCCGT GCCCGCACTG
CAGCCCAGCT AA
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| Protein sequence | MIKALVENGR LASLVIALLI VAGLGAITSL PRMEDPSITN RFASVVTHYP GASAERVEAL
VTEVLENQLR RLEELKLVQS TSRPGISVIQ LELKDRITET DPVWSRARDL VNDAKNLLPP
AAQNALLDDQ LGYANTAILG LVWQGAGEPR QDILNRYAKE LQSQLRLIPG TDFVKLYGAP
TEEILVQIDA QNVNRIGLSA AAIAQILANA DTKVSAGEIT NDAFRALVEV SGELDSVTRI
RQVPLKVDEN GQIIRLGEVA SVQRQPKTPA ASIALIEQAQ GIMVSARMLN NTRVDLWLQQ
VHRVVEKVQG DLSSNVEIQW LFDQEGYTTT RLSDLIASLL LGFIIILVVL MLTLGLRNAV
IVSLSLPLTA LFTLACMKYV GLPIHQMSVT GLVVALGIMV DNAIVIVDAI AQRRRQGLDR
LSAVGETLKH LWLPLAGSTI TTMLAFTPII LMPGAAGEFV GGIAISVIFA LLGSYLISHT
LIAGFAGRFG AEGDATHWYQ RGVNFPIIAR AFSKTLHIAL KRPLLAGVVI GILPITGFIA
SGQMTEQFFP PSDRDMFQIE VHLAPQSSIE NTRALVERID AKLRATGEMQ RLDWVIGGNA
PSFYYNLLQR QQGAANYAQA MIKVADFERA NQLIPRLQTQ LDAEFPEAQI LVRKLEQGPP
FNAPVELRIY GHNLDTLREI GDEVRRILIT TDHVLHTRAT LSAGAPKVWF QVNEDASKMS
GLSLTDIANQ IQMATTGING GSILEQTESL PIRVRTQDLM REQQTELSQI NLLSSNGVGI
PLSALASSRI DVSLGAIPRR DGQRVNTIEA YLESDVLPQQ VLNQAKTRID ALTLPAGYRI
EVGGESAKRN EAVGNLLSNI VLVITLLLAT VVLSFNSFRL TGIILLSAVQ SAGLGLLAVY
LFNYPFGFTV IIGLLGLMGL AINAAIVILA ELEDMPDRRE ASIDAIVQVV SSCGRHIGST
TITTIGGFLP LIIAGGGFWP PFAIAIAGGT ALTTLLSLVW VPTMYQLLMT KRQAAPVPAL
QPS
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