| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1271 |
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| Symbol | |
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| ID | 4920443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1469162 |
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| End bp | 1469710 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640162812 |
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| Product | SmpA/OmlA domain-containing protein |
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| Protein accession | YP_001093400 |
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| Protein GI | 127512203 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2913] Small protein A (tmRNA-binding) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.175523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.212441 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTGGGT ATCATGGCCG ACAGATTTTT AGGGAAGTAG CGCATTCAAT GACCATCAAA
AAACATAGTA TTACTCTATT AGGCGCAGCG GCGCTGTCTC TTTCATTAAG CGCATGCAGC
GTGTTCGACT GGCTGATCTA TAAACCAGAT GTGCCGCAAG GCAACTACAT GGAGACGCAG
CAGGTCGAGA AACTCAGAAT CGAGATGACC AAAGAGCAGG TCGAATATAT CCTGGGCCGT
CCCGTATTAA GAGACAGCTT CTCGGACGAC ACCTGGTACT ATGTCTATCA CTACAAGAGT
GGTCGTGACG CCAGCATCAC CCACAAAGAA CTGGTGCTGC ACTTTACCAA TGACAAGCTT
TCTAAAGTCG ATGGCGACTA TGAACTGGCC GCCGACTTTA ACACCCCGCT GGATCAGAGC
TCGCTACCAG AGCTAGGCGC CGCAAAGGGC GACCTGGTTC CGCTAAACCC TGAGCAGCGT
CCAGATACCA AGCCGCTCGT GGAAGAGAAG AAAGCACAAG AACTCAACGA AGTTAAAGAG
TTTGAATAA
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| Protein sequence | MLGYHGRQIF REVAHSMTIK KHSITLLGAA ALSLSLSACS VFDWLIYKPD VPQGNYMETQ
QVEKLRIEMT KEQVEYILGR PVLRDSFSDD TWYYVYHYKS GRDASITHKE LVLHFTNDKL
SKVDGDYELA ADFNTPLDQS SLPELGAAKG DLVPLNPEQR PDTKPLVEEK KAQELNEVKE
FE
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