| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1227 |
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| Symbol | |
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| ID | 4924320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1426467 |
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| End bp | 1428038 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162767 |
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| Product | glutamate--cysteine ligase |
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| Protein accession | YP_001093356 |
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| Protein GI | 127512159 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2918] Gamma-glutamylcysteine synthetase |
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| TIGRFAM ID | [TIGR01434] glutamate--cysteine ligase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATAGGCC TACTCGACAA CGAGCAGGGA AGCGCCGCAC TGGCAGGTAT GCAACGAGGT
ATCGAGCGCG AAGCATTGCG TATTGAGCCG AATGGTCATC TGGCCATGGA TAAACATCCT
AAGGCGCTCG GCTCGGCACT GACCCATTCG CGGATCACCA CAGACTACAG CGAGTCCCTG
TTAGAGTTTA TCACCCCTGT CTATCAAGAT ATCTCAGCCT TGCTGACGGA TCTCACCCAG
ACCCACGCCT TTTCGGTAAG GCACCTGGGC CTGCAGCAAC TCTGGCCGGT GAGCATGCCC
TGTTATGTCG GCGATGTAGC CGATATCCCC ATCGCCGATT ATGGCAGTTC TAATACCGGG
CAGCTAAAGC GTCTGTACCG CAAAGGCCTC ACCTATCGCT ATGGCGCCCA GATGCAGATC
ATCTCTGGCG TGCACTTTAA TTTTTCCGTG TCTGATGCAC TGTGGGAGCT GCTCTATCAA
GGCTCGGATA AACGCCTGAG CAAAGGCGAT TTCATCTCTG AATCCTATTT TGGATTGATC
CGTAACTACC GCCGCCTGGT ATGGGTATTG CCATATCTGT TTGGCGCCTC GCCGGCGCTG
TGTGGCTCCT TCATCAAAGG TCAACAAACT GATCTCGCCT TCGAGAAGTT AGGCAAAGGT
ACCCTCTATC TGCCCTATGC CACCTCGCTG CGCATGAGCG ATCTGGGTTA CACCAACAAG
GAGCAGGAGC GGCTCAACAT CAGCTACAAC TCGCTAGCTG AGTACCTCGA AGGGATCAAC
GCGGCGATCA AGATGCCATC GGCTCATTTC GAGAAGATCG GCGTCAAGGT CGAGGGCGAG
TTCCGTCAGT TAAATGCCAA CGTGCTGCAG ATAGAGAACG AGTTCTACTC GCCCATTCGG
GCTAAGCGGG TAACCCTCGC CGGCGAGAAG CCTTCTCAGG CCTTGGCCCG CGCTGGGGTC
GAATATATCG AGGTGCGTGC ACTGGACGTC AACCCCTTCA GCCCTGTGGG GATAGATGCC
GATCAGGTGC GTTTCCTAGA TCTCTTCCTG CTGCACTGCC TATTGACGCC ATCGCCAAAG
AGCGATGCGA CAGATGAGGC CGCCATTGGC GCTAACCTAA GTAAGGTGAT CACCCGTGGC
CGTGAGCCTG GATTGACCCT GAATCGTGGG GGCGAGCAAG TTACGCTACA GGCCTGGCTC
GAGTCCCTGT TTGGTGAGCT AAGCACCTTG GCTAAGCTGC TCGATGGTGA GGGACAGGCT
TATCAAGACA GCCTGGCACA TTGGCTCGAG GCGGTGCGCG ACCCAGCCAA GACGCTATCT
GGTCGCGTGA TGTCTGCACT ATTGGCCGAG GGGATAGATC ATAGCCAGTG GGTGAAATCC
CTGGCGAAAG ACTATTACCA TGCCCTGCGC GATTATCCGC TGACGCCTGA GGTTGAGGCG
GCCTATGAGG CGGCGGCCGA GCAATCCTTG GCGGCCCAGG CCAAGCTCGA GGCGGAATCA
GTGCAGGATT TCGAGCAGTA TCTTGCCGAC TATTTCGCCG AGGCGCCCGC GCCGGTAGAT
CAAGTGGTAT AA
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| Protein sequence | MIGLLDNEQG SAALAGMQRG IEREALRIEP NGHLAMDKHP KALGSALTHS RITTDYSESL
LEFITPVYQD ISALLTDLTQ THAFSVRHLG LQQLWPVSMP CYVGDVADIP IADYGSSNTG
QLKRLYRKGL TYRYGAQMQI ISGVHFNFSV SDALWELLYQ GSDKRLSKGD FISESYFGLI
RNYRRLVWVL PYLFGASPAL CGSFIKGQQT DLAFEKLGKG TLYLPYATSL RMSDLGYTNK
EQERLNISYN SLAEYLEGIN AAIKMPSAHF EKIGVKVEGE FRQLNANVLQ IENEFYSPIR
AKRVTLAGEK PSQALARAGV EYIEVRALDV NPFSPVGIDA DQVRFLDLFL LHCLLTPSPK
SDATDEAAIG ANLSKVITRG REPGLTLNRG GEQVTLQAWL ESLFGELSTL AKLLDGEGQA
YQDSLAHWLE AVRDPAKTLS GRVMSALLAE GIDHSQWVKS LAKDYYHALR DYPLTPEVEA
AYEAAAEQSL AAQAKLEAES VQDFEQYLAD YFAEAPAPVD QVV
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