| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1182 |
|---|
| Symbol | |
|---|
| ID | 4922885 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 1372354 |
|---|
| End bp | 1373472 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640162716 |
|---|
| Product | metallophosphoesterase |
|---|
| Protein accession | YP_001093311 |
|---|
| Protein GI | 127512114 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCTAG ACTCAGCGCT TAAGGCGGCC AGCTTATGCC TGGCCGGTTT ACTGCCCCTA
CAGGTTTTAG CCGTTCAGGC ACAAACTGAG CAAGAGACTA AGGCAGTGAC TCAAGCCAGT
ACGAATTCAG GCATTAATGA CGGCCCCTAT CTATTTCTCA ACCCCAAGGC CGATATGGCC
GATTGGATCT GCGAAGGAGA GCATAAACAG ACCCGCGTCG ATCAAGGTAA GCTGAGTCGC
CCCGAACATT GCGGCAAACT TCCTGAGCCC AACCTGAATC CGCAGGCTAA AGAGGTGCTG
GCAGACAGCT ATCAGGGAGT GGATAAGATA GTGGCGCTCA GCGACGTTCA TGGTCAATAT
GAGGTGCTGC TGCAGCTGCT GCGCCGCCAT AAGATCATCG ACCAGGATAA CAACTGGGCC
TTCGGCAAGG GCCATATGGT GATGACGGGC GATATGTTCG ACCGCGGCCC TCAGGTTAAC
GAGGTACTCT GGTTCATGTA CAAGCTCGAC AAGCAGGCCA AGGCCGCCGG CGGCCAGCTG
CACCTGTTGA TGGGCAACCA CGAACAGATG GTGATGCGCG GTGACCTGCG CTACGTCAAC
GACAAGTACC AGACTGTCAG CAAGCTGCTT GATCGCCCCT ATGATGCGCT CTACGGTCAA
GACAGCGAAC TCGGCCAATG GCTGAGAAGT AAGCACACTA TCGTTAAGAT CAACGACACC
CTCTTCCTCC ACGGCGGTAT CAGTCAGGAG TGGGTCGACC GCGGCTTGAC ACTGGCCAGG
GCCAACAGCC TCTACCGGGA AAATATCGAC AAGAGTAAGG CTGAGCTGAA GCAAGATGAG
CTGCTCAACT TTCTCTTCTT CGGCAACGGC CCCACCTGGT ATCGCGGCTA CTTTAAGCCA
GACTTCGATA CCCAGGAGCT GGCCAACATC CTGGACTACT TCAAGGTCAA GCGCATCGTC
GTGGGCCATA CCTCACAGAC TCGGGTACTA GGCCTGTTCG ACAACCGGGT TCTCGCCATC
GACAGCAGCA TCAAAAAAGG CCTGTCTGGT GAACTGCTCC TCATAGAGAA AGACCAGCTG
ATCCGCGGTC AGTATGACGG CAGCCAAACA CCGCTATGA
|
|---|
| Protein sequence | MPLDSALKAA SLCLAGLLPL QVLAVQAQTE QETKAVTQAS TNSGINDGPY LFLNPKADMA
DWICEGEHKQ TRVDQGKLSR PEHCGKLPEP NLNPQAKEVL ADSYQGVDKI VALSDVHGQY
EVLLQLLRRH KIIDQDNNWA FGKGHMVMTG DMFDRGPQVN EVLWFMYKLD KQAKAAGGQL
HLLMGNHEQM VMRGDLRYVN DKYQTVSKLL DRPYDALYGQ DSELGQWLRS KHTIVKINDT
LFLHGGISQE WVDRGLTLAR ANSLYRENID KSKAELKQDE LLNFLFFGNG PTWYRGYFKP
DFDTQELANI LDYFKVKRIV VGHTSQTRVL GLFDNRVLAI DSSIKKGLSG ELLLIEKDQL
IRGQYDGSQT PL
|
|---|
| |