| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1113 |
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| Symbol | |
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| ID | 4924323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1284252 |
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| End bp | 1285778 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640162646 |
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| Product | tryptophan halogenase |
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| Protein accession | YP_001093243 |
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| Protein GI | 127512046 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATTA AGCGTATCCT TATATTGGGC GGCGGCACGG CAGGCTGGTT GGCGGCCAAT
CACCTGGGCA AGGCCCTTGA ACATCGCCAG GACGTGACCA TCACGCTGGT GGAGTCTCCC
GATATTCCCA TTATTGGGGT TGGCGAAGGT ACAGTACCCG CCATTCGTCA GAGCCTGAAA
CGCTTCGGGA TAAGTGAATC TGAGTTTATT CGTCGGTGTG ACGTCACCTT CAAGCAGTCA
ATCAAGTTCG TCAACTGGAT GGATAAGGAC CGTCACGGAG CGGGAAACTT CTATCATCAT
CTGTTCGATA TGCCTAGCCC TTTGGGGGAG GATCTGACCC AGCATTGGCT AGATAATACT
AATACTGCAT ACGGCGACAT GGTCTCGCCT CAGCACAAGG TGTGTGAAGC CGGGCGGGCG
CCAAAGCGGA TCACCCACAG TGAATATGAG GGAGCGCTGG GTTACGCCTA TCACCTCAAT
GCGGCTAAGT TTGCCAAGCT GCTTGCCGAA AATGCCATCA GGCGTTTCAA CGTCGAACAT
ATCATGGCCA ATGTGCAAGA GGTCACGCTA AGGGAAAATG GCGAGATCGC CTCCCTGGAA
ACCGATTGCC GGGGCAGTAT TGGCGCCGAC TTTTTTATCG ATTGCAGTGG CTTTGAATCC
TTGCTTATCG ACAAGACGCT CAAGGTGCCC TTTGTCGATA AGTCTCATCA GCTGTTTGCC
GACAAGGCAA TAGCAGTGCA GGTACCCATT GATGAGAATG AGGCGATCCC GCCTTATACC
CTGGCGACGG CGCATCAGGC CGGCTGGATA TGGGATATCG CCTTGACCCA TAGGCGCGGT
GTCGGGTTTG TCTACTCCTC TAAATATATG GATGATGACA CAGCGCTTAA CAAGCTCTCC
CGTTATCTGG GACAGGATAT CGCCCAGTAT CAGTATCGGG TCTTGCCGAT GAAGCTTGGC
TATCGCAGGG AGTTCTTGCA TAAGAATTGC CTCTCCTTGG GATTGGCTCA GGGCTTCCTC
GAGCCCTTAG AAGCCACCTC TATCTTGCTG ACCGATTTTG CCGCAGGCTT CGTGGCTAAT
CGCATGCCTA AGGATAGCGA GGCGCTTGCC TTGCTCTCTG AACAATTTAA TCAGGTGATG
ACCTATGCCT GGGAGCGCGT CGTCGAATTT ATCAAGATGC ACTACTGCCT GTCAGACAGG
AGTGATGCGC CGTTCTGGGT CGATAATCGC GATTCGGAAA CGATCCCCAG TGAACTCGCC
ACTCGACTCA AGCTGTGGCA AAACCATTAC CCCATAAGGC AAGATTTCTT CAGCAAGTTT
GAGGTGTTCG ACTTAGAGAA CTATCTCTAT GTCCTCTATG GCATGCATTA TCCAACGGCG
CCTCAAGTTG CAGCTAAAGA TCGCAGAGAA GCCTGGCAGG CCCAGGCTAG GCAGATAGCG
AGTGTGGGTG AGCACCTGAT GAAGGAGCTG CCAGAACACA GGGAGTTGCT AGAGAAGATC
GCGGTATATG GCTTACAAAA ATGTTGA
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| Protein sequence | MDIKRILILG GGTAGWLAAN HLGKALEHRQ DVTITLVESP DIPIIGVGEG TVPAIRQSLK
RFGISESEFI RRCDVTFKQS IKFVNWMDKD RHGAGNFYHH LFDMPSPLGE DLTQHWLDNT
NTAYGDMVSP QHKVCEAGRA PKRITHSEYE GALGYAYHLN AAKFAKLLAE NAIRRFNVEH
IMANVQEVTL RENGEIASLE TDCRGSIGAD FFIDCSGFES LLIDKTLKVP FVDKSHQLFA
DKAIAVQVPI DENEAIPPYT LATAHQAGWI WDIALTHRRG VGFVYSSKYM DDDTALNKLS
RYLGQDIAQY QYRVLPMKLG YRREFLHKNC LSLGLAQGFL EPLEATSILL TDFAAGFVAN
RMPKDSEALA LLSEQFNQVM TYAWERVVEF IKMHYCLSDR SDAPFWVDNR DSETIPSELA
TRLKLWQNHY PIRQDFFSKF EVFDLENYLY VLYGMHYPTA PQVAAKDRRE AWQAQARQIA
SVGEHLMKEL PEHRELLEKI AVYGLQKC
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