| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1105 |
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| Symbol | |
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| ID | 4922769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1273540 |
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| End bp | 1273974 |
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| Gene Length | 435 bp |
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| Protein Length | 144 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640162638 |
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| Product | type IV pilus assembly protein PilX |
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| Protein accession | YP_001093235 |
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| Protein GI | 127512038 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.711381 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAAC AGCAGGGGAT AGTACTTTTT CTTTCCCTGA TAATTCTCAT TATCATGACT
GTAATAGGTG TTGCTTTAGC TGTTAACTCT ACACAGTCTC TTCGTATGGC TGGTGCTGGC
TCTGAAAGAA TTGAAGCTAA GGCAATAGCT GACGGTGGGC TTTCGCAAGT TATTGATAAT
TATTCCGGTG CCGCTTTTGC CAATCTTTCT AATAAGGTCA CCGAGACAAC TTTTAGTAGT
ACGCAAGTGA TAACCCCACT CCCTGAGACA GCAGTTAAGG ATGTTGGTTG TCAAAGAACT
ACCAACGCCA CAGGGGCTAA CTTAGTGAGT TGTCGTCGTG CTCAGGTTAC CAGTACTGCC
GTTTTTGGCC GTGACAATCT CGGCTCTCTA ACAGTAGCTT CAGGCATCGA ACAGCAAGTA
CTTACAGGAA ACTAG
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| Protein sequence | MKKQQGIVLF LSLIILIIMT VIGVALAVNS TQSLRMAGAG SERIEAKAIA DGGLSQVIDN
YSGAAFANLS NKVTETTFSS TQVITPLPET AVKDVGCQRT TNATGANLVS CRRAQVTSTA
VFGRDNLGSL TVASGIEQQV LTGN
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