| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1099 |
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| Symbol | ileS |
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| ID | 4923352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1267071 |
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| End bp | 1269893 |
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| Gene Length | 2823 bp |
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| Protein Length | 940 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640162632 |
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| Product | isoleucyl-tRNA synthetase |
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| Protein accession | YP_001093229 |
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| Protein GI | 127512032 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0060] Isoleucyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00392] isoleucyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0237833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.10844 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACT ATAAATCTAC TTTAAACTTG CCGGAAACTG AGTTTCCGAT GCGTGGTAAT
CTGGCACAAC GTGAGCCAGA GATGTTGAAA TCTTGGACAG AAAAGAAACT GTACCAAAAG
ATTCGTGAAA GCCGCACAGG TGCCAAGCCA TTCATTCTGC ATGATGGCCC ACCGTACGCT
AACGGTAGCA TTCATATTGG TCACTCAGTA AATAAGATCC TTAAAGACAT TATTATCAAG
TCTAAGACCC TGTCGGGTTT TGACGCGCCA TATATTCCAG GTTGGGACTG TCACGGTTTG
CCAATCGAGC TTAAGGTCGA GCAGAAAGTG GGTAAGCCTG GCCAGAAGGT CTCTGCGGCC
GAGTTTCGTC AGAAGTGTCG CGAATACGCT GCTGCCCAGG TAGATGGTCA GCGTGAAGAC
TTTATCCGTC TTGGCGTGCT GGGCGACTGG CAAAATCCTT ACCTCACCAT GAACTTCGAC
ACCGAAGCCA ACATAGTTCG CTCTTTGGCT AAGGTGATCG ACAACGGCCA CCTGCACAAA
GGTGTTAAGC CTGTGCACTG GTGTACCGAT TGTGGTTCAG CACTGGCTGA AGCGGAAGTC
GAATATGAAG ATAAGACTTC ACCTGCCATC GATGTTGCCT TTGTGGCGGT CGATCAAGCG
GCTGTGCTGG CTAAATTCGG ATTAGAGCAA TCTGACGCCG AAGTGGCGAC CGTTATCTGG
ACCACAACGC CTTGGACACT GCCTGCTAAC CGCGGCCTCT CAATGGCCGG TGATATCGAT
TACGATCTGG TTGAGTTCAC TAAAGATGGC AGCAAGCGCG CGATTATTGT GGCGCAGGAG
CTGGTTGAGT CTTGCATCGA GCGTTACGGC GCCGAGTTGC ACAGTGTGCT GGGCACAGTG
AAAGGTCAGG CGCTGGAGTT GCTGCGCTTT AAGCATCCTT TCTATGATTT CGATGTGCCT
GTCATCATAG GCGACCACGT CACTGTTGAT TCGGGTACCG GTGTGGTACA CACGGCTCCT
GGCCACGGTC AGGACGACTT TGTTATCGGG CAAAAATATG GTCTGGAAGT GGCTAACCCT
GTAGGGGATA ACGGTGTCTA CAAGCCAGAT ACCGAGTTCT TCGCCGGCCA ACATGTCTTT
AAAGCCAACG ATAATGTGGT TGCACTGCTC GAAGAGAAGG GCGCACTGCT GAATCATGTG
GCTTATCGTC ACAGCTACCC ACACTGCTGG CGCCATAAGA CACCTATTAT CTTCCGCGCG
ACGCCGCAGT GGTTCATCTC TATGGACCAA AAAGGTTTAC GTACTCAGTC GCTGAGCGAG
ATCGAGAAGA CGCAATGGAT CCCTGACTGG GGTCAGAGCC GTATCGAGAA GATGGTCGAG
AACCGCCCTG ACTGGTGTAT CTCACGTCAA CGTACCTGGG GCGTGCCTAT CACCCTGTTT
GTACACCGTG ATACCGAAGA GTTACACCCT GACAGTGTTG CCCTGATGGA GCGCGTTGCC
CATCGCATCG AGCAAGAAGG TATTCAGGCT TGGTGGGATC TCGACGCCGC AGAGCTGTTA
GGCGAAGAGG CCGACCAATA CCGTAAGGTC ACCGATACCC TAGATGTCTG GTATGACTCA
GGCTCTACCT TCTCATCTGT GGTTGCCGCG CGTCCTGAAT ACAATGGTCA TCCTGTTGAC
CTTTACCTAG AAGGTAGCGA CCAGCACCGT GGTTGGTTCA TGTCATCACT GATGATCTCT
ACCGCCATGA ACGGCAAGGC GCCTTACAAG CAGGTATTGA CCCATGGTTT CACCGTGGAT
GGTCAGGGCC GTAAGATGTC AAAGTCGATC GGTAACGTGA TCGCCCCGCT GCAAGTCACC
AATAAGCTAG GCGCCGACAT TTTGCGTCTT TGGGTGGCGG CGACCGATTA TAGCGGTGAG
ATGACAGTGT CTGATGAGAT CCTTAAGCGT AGCGCCGATG CTTACCGTCG TATCCGTAAC
ACGGCGCGTT TCCTGCTGGC TAACCTAAAT GGTTTCGATC CGGTAAACGA CACCGTTGCC
ATCGAAGATA TGGTGGCGCT GGATCGCTGG GTGGTGCGCC GCGCTGCCGC CTTGCAAGCC
GAGATCTTAG AGGCTTACGA GCAATATAAC TTCCACCTAG TGACTCAGAA GCTGATGCAG
TTCTGCTCTG TTGAGCTTGG CAGCTTCTAT CTGGATATCA TCAAAGACAG ACAGTACACG
GCTAAGCGTG ACAGCCTGGC ACGTCGTAGC TGTCAGAGCG CGCTGTTCCT GATCGCCGAA
GCCATGGTGC GCTGGATTGC GCCAATCCTG AGCTTTACCG CCGATGAGGT ATGGCAGTCG
CTGCCGGGCG AGCGTGAAGA GTTTGTCTTT ACTCAGACTT GGTTCGAAGG CCTGGTCTCT
GTGACCCTAG ATAGTGACCT GAGCGACGAT TATTGGGCAA ATCTCATCAC AGTACGTGAT
GAGGTGAACA AGGCCATCGA GCAGGCGCGC CGCGAGCAGC GTGTCGGCGG TTCGTTAGAA
GCCGAAGTGA CTATCTATGC CGATGAGGCC TTAACAGAGT CTCTGGCGCT GCTGGGTGAT
GAGCTGCGCT TCGTGTTGCT GACCTCTAAT ACTCAGATTG CCCCGCTGGC GAACGCCGGT
GACGATGCGG TTGAGACAGA GCTGGCTGGT CTTAAGCTAT TAGTGGATAA GACAGAGGCG
GCCAAGTGCG ATCGCTGCTG GCATCACAGA GAAGATGTGG GTCAGGTTGA AGCGCATCCA
CTGCTGTGTA CACGCTGTGT GACCAACATC GAAGGTGACG GCGAAGTTCG CCAGTTCGCA
TAA
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| Protein sequence | MSDYKSTLNL PETEFPMRGN LAQREPEMLK SWTEKKLYQK IRESRTGAKP FILHDGPPYA
NGSIHIGHSV NKILKDIIIK SKTLSGFDAP YIPGWDCHGL PIELKVEQKV GKPGQKVSAA
EFRQKCREYA AAQVDGQRED FIRLGVLGDW QNPYLTMNFD TEANIVRSLA KVIDNGHLHK
GVKPVHWCTD CGSALAEAEV EYEDKTSPAI DVAFVAVDQA AVLAKFGLEQ SDAEVATVIW
TTTPWTLPAN RGLSMAGDID YDLVEFTKDG SKRAIIVAQE LVESCIERYG AELHSVLGTV
KGQALELLRF KHPFYDFDVP VIIGDHVTVD SGTGVVHTAP GHGQDDFVIG QKYGLEVANP
VGDNGVYKPD TEFFAGQHVF KANDNVVALL EEKGALLNHV AYRHSYPHCW RHKTPIIFRA
TPQWFISMDQ KGLRTQSLSE IEKTQWIPDW GQSRIEKMVE NRPDWCISRQ RTWGVPITLF
VHRDTEELHP DSVALMERVA HRIEQEGIQA WWDLDAAELL GEEADQYRKV TDTLDVWYDS
GSTFSSVVAA RPEYNGHPVD LYLEGSDQHR GWFMSSLMIS TAMNGKAPYK QVLTHGFTVD
GQGRKMSKSI GNVIAPLQVT NKLGADILRL WVAATDYSGE MTVSDEILKR SADAYRRIRN
TARFLLANLN GFDPVNDTVA IEDMVALDRW VVRRAAALQA EILEAYEQYN FHLVTQKLMQ
FCSVELGSFY LDIIKDRQYT AKRDSLARRS CQSALFLIAE AMVRWIAPIL SFTADEVWQS
LPGEREEFVF TQTWFEGLVS VTLDSDLSDD YWANLITVRD EVNKAIEQAR REQRVGGSLE
AEVTIYADEA LTESLALLGD ELRFVLLTSN TQIAPLANAG DDAVETELAG LKLLVDKTEA
AKCDRCWHHR EDVGQVEAHP LLCTRCVTNI EGDGEVRQFA
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