Gene Shew_1071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1071 
Symbol 
ID4920583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1233877 
End bp1234212 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content53% 
IMG OID640162604 
Producthypothetical protein 
Protein accessionYP_001093201 
Protein GI127512004 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTATCGA CTACGTCACA GCCTGTCGTT TTAGACGACC ATAGCCTTGG CCATCTACTG 
TATGCCTTGA TGTCGGCCTT TCCGCTGCTG TTGCTGCCGC CCCTGTTTGC CCTGATGATC
AGTCTCGGGC AGAAGGGGGA TAAGATGAGC AGCCTGCTCT ATTCCCACAT ACGTTGGCAG
CGTTGGTCGA TTATCTCCTT GTTTTCGCTA TTATTGCTGG CCTACTTAGT GCCTCAAGGC
TGGATGGCCG TGAGTCTGTC ACTGCTGGCG CTCTTGTGGT TTTGTCATCG CACCATCAAA
GGCTGGATGA ATCTGGTGGA TGGCCTGGCG ATTTAA
 
Protein sequence
MVSTTSQPVV LDDHSLGHLL YALMSAFPLL LLPPLFALMI SLGQKGDKMS SLLYSHIRWQ 
RWSIISLFSL LLLAYLVPQG WMAVSLSLLA LLWFCHRTIK GWMNLVDGLA I