| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1061 |
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| Symbol | |
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| ID | 4924360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1223020 |
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| End bp | 1223808 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640162594 |
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| Product | cytochrome c assembly protein |
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| Protein accession | YP_001093191 |
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| Protein GI | 127511994 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4137] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000186655 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGATTT TTTCGGCTTC AGCCATTTTC TTCTACAGTA TCGCACTCGT CTTGGTCGTC
AGCCGACTGT TTCATGCCGA TGGCCCTAAC CGTAAAGCCG TAGCCGCCTT CGCCGCCGTG
GCCGTGGTGC TTCATGCCGC CGCCCTGTCT CAGGCCATCT TCACCGGTGA CGGTCAAAAC
TTCAGTCTGA CCAATGTGAT CTCCATGGTG AACTGGATCA TCGCCTTCAC CTTCACCATC
TTGATGTTCC GCCTCAAGGT AATCGTCGTC GTGCCCGTGG TCTATGCGTG CTCTGTCATC
TCGGTGGCGC TGCTGTGGCT ATTACCGCCT AAATATATCA CCCACTTCGA GCTTTACCCC
GAGGTGTTGG CCCACGTGGT GCTGTCGCTG ATGGCCTATA GTGCCCTAAT GATCGCCGCG
CTTTATGCCA TCCAACTGGC GATGATTCAA AACAAGCTGA AGAAGAAGCA GCTGATGCTG
AGCCCGGCGA TTCCACCGCT GATGACGGTA GAGAAGCAAC TTTATCACCT GGTGATCATC
GGCGTGGTGC TGCTGAGTCT GTCGCTGGCG ACTGGCTTTA TCTTCCTCGA TGATATGTTT
GCCGACGGCC AGGGCCATAA GGCGATCCTC TCTATCATTG CCTGGTTTAC CTATATCGCC
ATGCTGGCGC AGCAGTACTG GGTAGGTTGT AAGATCCGCA CCGCCGTGGC CTATACTCTG
ACTGGCGCAA CCCTGCTGTC ACTGGCCTAC TTCGGCGCCC GCATCGTCAA AGAACTGATC
CTGCAATAG
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| Protein sequence | MVIFSASAIF FYSIALVLVV SRLFHADGPN RKAVAAFAAV AVVLHAAALS QAIFTGDGQN
FSLTNVISMV NWIIAFTFTI LMFRLKVIVV VPVVYACSVI SVALLWLLPP KYITHFELYP
EVLAHVVLSL MAYSALMIAA LYAIQLAMIQ NKLKKKQLML SPAIPPLMTV EKQLYHLVII
GVVLLSLSLA TGFIFLDDMF ADGQGHKAIL SIIAWFTYIA MLAQQYWVGC KIRTAVAYTL
TGATLLSLAY FGARIVKELI LQ
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