| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0988 |
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| Symbol | |
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| ID | 4922548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1141764 |
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| End bp | 1144076 |
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| Gene Length | 2313 bp |
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| Protein Length | 770 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640162520 |
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| Product | hypothetical protein |
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| Protein accession | YP_001093118 |
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| Protein GI | 127511921 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATGA AAACAGCACT TCTGCTACTC CCTCTTCTGC TGAGTAGCTC ATTGGCGTTT
GCGTCGATAA CTGACGTTGA TCCTCAAGAC AAAAGCTTGG AGTACCTCCG TTATATATTT
GGCTCGACTG TTGACATCAT TACTGGAGGA ACGGGGCCTT CCGCTCCAGA TTCAGTGCTA
GGTGCAATGT CACAGATTCT GAACACAGGA ATGCTTGTGT TTACCGGCCT AATAATCGGT
TACGTGTTTT TAACCGGAGT ATTGAATTCG GCTCACGAAG GAAACCCTCT TGGGAAGATG
TATTCTACTA TGTGGGTACC ACTACGAATG GTCGTAGCCT TGGCTCTGGT TTTGCCATTC
AGTGGGGGTT ACTCCACTAT GCAGATTGGT GTGCTTTGGT TGGCCGGACA TGGAATTGGA
TTGGCAAACT CAACGTGGAA TATGGCCCTA GATCATATCA GTGGGACTGG TACGCTATAC
CCTCCGCAGA TTGCCATCAA CTATGAACAA ACGGCCATGC GAATTTTAGA ATCGCGCGTT
TGTATGCATG GAATCAATAC CGCTGACCGG CATGTAAATA TTGAGGAGAA GCCGATTGAA
ATTGTTGCTG ATGATCAAGT GGTTTCCATG CGTTCATCCG GTTCAACGGG GTCTACCCTG
GTTCCTGTTC AGCACAAAGT CATGCAGCGG TATGACAGTC GCTACAGTCT GGCTGGTGCC
GGCGTCGCGT ATGGCGCAGC CTGGCTTTCT GGTTTTCCGA GTGGTGTTCC GAGAAGTTAC
GGCTCGAATC CCTGCGGTTC TATCAGTCTG GAATTCGCTG AAATTGACGA AGGGACGGCG
ATAGATGTTC CCGTCAGGAG TTTTCAGTCA AAAATCATTC AGGCTCATGC AGATCTGGAT
GAGGATCTCG ATGCCTTGGC AAGAGAGATT GTGCTAAAGG CGGTGGATGA TACCGCGCCC
GATCCTGATC CAACCGCCTA CAACATGGCT GTCCAGCAAT TCAAAATTGG CTATGACAAA
GCCGTTAATG ATGCACTAAG CGAAATTGCT ACTGCTCGCA TAAATAAATG GGCAGGCGGC
AATCCCGATG CTGCTGGTAT GACCGTGGGT GCTCGGGATG CCGGATGGAT TTCAGTCGGC
GCATGGTATT GGGACTTGCA ACGAGTTAAT GCTGAAACAC AAAAAATGGT ATCAGTACAG
GCAGAATTAT CAGGGCCAAC GGAATCGGCC ATAGAAAATG CAGATTACAA AATATTCTCC
AGCGCCCTGT CAGCTTATTC TCAGAATATG CAAGTTACTG ACCCAAGAAC CGGCGCACTC
GTGAATGCAA TGGAACGATC TACTTATGCA GACGACAATA ACGGGCTGGG CGTTGTTATG
AGCACTGCTG ATTCAATATT GAATTTTGCA TTGAGTGAGC CAGACCCTAT TGCTGGTATG
GCAAACGTTG GACACACGAT AATAACGGCC TTTGAGACAA CGCTTGCGGC GGCATTTTTG
ACTGACCTGG CAGCTTGCGT TGCCGATGAC ACCAGCGAAG CTGTAGGCGG TCTGATCGGC
GGGGCCTCAC GACCCGTAAC CAGCACGCTT TGCCGTATGA CAAACAAAAC TCTATGGTCT
CTGGTCGGCG CGGGTTTTTT ACTGATTCCA ATCGCGCTGA TGCTGGCATT TTATCTACCA
GCCACCCCTA TGATTCTCTG GATCATGGGT GTAGCTGGCT GGCTTGTAAT GCTCATCGAG
GCCGTAATAG CGGCTCCTGT TTGGGCCGTG AGCCATGCCA TGCCTGAGGG GCAGGGGTTC
ATAGGGGAGA GAGCCAAAGC GGGCTATATG GTGGCCCTAT CGCTATTTCT GAGGCCGACT
CTTGCCATAT TTGGTTTTTT CTCAGGAATG CTGCTGGTCA TCGTCATGGG TAAGGTTCTC
ATGTTGCTTT TTCTACCGGC AATGAGTGGG ATGATAGGTG ATAGCCTGTC CGGCGTAGTC
ACACTGGCCG CGTTACTGGC AATCTTCACC ATTGTCCTGA TCCAGATCGC GCATCGAGCT
TACGGATTAA TTCATGAAGT CCCAGACAAG GTATTACGGT ACATTGGAGG GGGGGCTGAG
AATTTGGGTG AAGCGTCCAA TGAGCAGCAA AGCCGCAGTA TTTTTGTTGG TGGTGCAGCA
AAATTGGTGG GCGGGGCTGG TCACTCAATG AGAGATAAAA CCCGTGGTGG TGCTCAATCA
ATGTCGGAAG CAGCAGGCAA TGGAATCAAA AGTGCTACCG GTGCTGCAAA ATCGGGGATG
AGCAAAATCA GCAAAATGCT CAGCCCCAAG TAA
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| Protein sequence | MRMKTALLLL PLLLSSSLAF ASITDVDPQD KSLEYLRYIF GSTVDIITGG TGPSAPDSVL
GAMSQILNTG MLVFTGLIIG YVFLTGVLNS AHEGNPLGKM YSTMWVPLRM VVALALVLPF
SGGYSTMQIG VLWLAGHGIG LANSTWNMAL DHISGTGTLY PPQIAINYEQ TAMRILESRV
CMHGINTADR HVNIEEKPIE IVADDQVVSM RSSGSTGSTL VPVQHKVMQR YDSRYSLAGA
GVAYGAAWLS GFPSGVPRSY GSNPCGSISL EFAEIDEGTA IDVPVRSFQS KIIQAHADLD
EDLDALAREI VLKAVDDTAP DPDPTAYNMA VQQFKIGYDK AVNDALSEIA TARINKWAGG
NPDAAGMTVG ARDAGWISVG AWYWDLQRVN AETQKMVSVQ AELSGPTESA IENADYKIFS
SALSAYSQNM QVTDPRTGAL VNAMERSTYA DDNNGLGVVM STADSILNFA LSEPDPIAGM
ANVGHTIITA FETTLAAAFL TDLAACVADD TSEAVGGLIG GASRPVTSTL CRMTNKTLWS
LVGAGFLLIP IALMLAFYLP ATPMILWIMG VAGWLVMLIE AVIAAPVWAV SHAMPEGQGF
IGERAKAGYM VALSLFLRPT LAIFGFFSGM LLVIVMGKVL MLLFLPAMSG MIGDSLSGVV
TLAALLAIFT IVLIQIAHRA YGLIHEVPDK VLRYIGGGAE NLGEASNEQQ SRSIFVGGAA
KLVGGAGHSM RDKTRGGAQS MSEAAGNGIK SATGAAKSGM SKISKMLSPK
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