Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0945 |
Symbol | |
ID | 4923586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1085349 |
End bp | 1085984 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640162477 |
Product | hypothetical protein |
Protein accession | YP_001093075 |
Protein GI | 127511878 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGATTTTT TACTGCTTAC CGATAACTTA CCCTACAGCC TGGCGCTGGC CTTGGTGATC CTCTTGGGCC TGGTCGAAGG CTTCTCTATG GTCTTTGGCC TGAGTCTGTT TGGCCTGCTG GACGATCTGA CGCCCATGGA GATGGACGCC GATGTCGACA CCGGCGTGTC TGGGGTCACA GGCGTAGCCG GCTGGCTCTG CCTGGATCGC CTGCCACTGC TTATCTGGCT GGTGCTGGCC CTGACCAGCT TCGCCATCGC CGGCTTTGCG ATCAACTATC TGGCAATCTC GTTTCACGGC GCCTTGCCGG CGCCCCTAAG TATTCCGCTG GCCATAGTGC TCGGCGCATT TTCCTGCCGT ATCCTCGGCG CCCGTCTCGC CAATCTGTTG CCCAAGAATG AAACCTCGGC TGTCTCGGTA GACGAGCTCA GCGGTCTGGT AGGCGTCGTG ACCTTAGGCT GTGCCCGCAA GGGATTTCCC AGCGAGGCAG TGGTGAAAGA TGCCTATCAG CAGAAACATT ATGTGCTGGT GGAACCCGAG CTGGCGGGCG AGGCCTTCTC CCAGGGCACC TCTGTGGTGC TGCTCAATCG CAATGGCCAG GTCTGGTCTG TGGTGCAATT TAACGATGAA ATTTAG
|
Protein sequence | MDFLLLTDNL PYSLALALVI LLGLVEGFSM VFGLSLFGLL DDLTPMEMDA DVDTGVSGVT GVAGWLCLDR LPLLIWLVLA LTSFAIAGFA INYLAISFHG ALPAPLSIPL AIVLGAFSCR ILGARLANLL PKNETSAVSV DELSGLVGVV TLGCARKGFP SEAVVKDAYQ QKHYVLVEPE LAGEAFSQGT SVVLLNRNGQ VWSVVQFNDE I
|
| |