Gene Shew_0945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0945 
Symbol 
ID4923586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1085349 
End bp1085984 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content59% 
IMG OID640162477 
Producthypothetical protein 
Protein accessionYP_001093075 
Protein GI127511878 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATTTTT TACTGCTTAC CGATAACTTA CCCTACAGCC TGGCGCTGGC CTTGGTGATC 
CTCTTGGGCC TGGTCGAAGG CTTCTCTATG GTCTTTGGCC TGAGTCTGTT TGGCCTGCTG
GACGATCTGA CGCCCATGGA GATGGACGCC GATGTCGACA CCGGCGTGTC TGGGGTCACA
GGCGTAGCCG GCTGGCTCTG CCTGGATCGC CTGCCACTGC TTATCTGGCT GGTGCTGGCC
CTGACCAGCT TCGCCATCGC CGGCTTTGCG ATCAACTATC TGGCAATCTC GTTTCACGGC
GCCTTGCCGG CGCCCCTAAG TATTCCGCTG GCCATAGTGC TCGGCGCATT TTCCTGCCGT
ATCCTCGGCG CCCGTCTCGC CAATCTGTTG CCCAAGAATG AAACCTCGGC TGTCTCGGTA
GACGAGCTCA GCGGTCTGGT AGGCGTCGTG ACCTTAGGCT GTGCCCGCAA GGGATTTCCC
AGCGAGGCAG TGGTGAAAGA TGCCTATCAG CAGAAACATT ATGTGCTGGT GGAACCCGAG
CTGGCGGGCG AGGCCTTCTC CCAGGGCACC TCTGTGGTGC TGCTCAATCG CAATGGCCAG
GTCTGGTCTG TGGTGCAATT TAACGATGAA ATTTAG
 
Protein sequence
MDFLLLTDNL PYSLALALVI LLGLVEGFSM VFGLSLFGLL DDLTPMEMDA DVDTGVSGVT 
GVAGWLCLDR LPLLIWLVLA LTSFAIAGFA INYLAISFHG ALPAPLSIPL AIVLGAFSCR
ILGARLANLL PKNETSAVSV DELSGLVGVV TLGCARKGFP SEAVVKDAYQ QKHYVLVEPE
LAGEAFSQGT SVVLLNRNGQ VWSVVQFNDE I