| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0934 |
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| Symbol | |
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| ID | 4920859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1067836 |
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| End bp | 1068750 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640162466 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001093064 |
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| Protein GI | 127511867 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000927672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACGTT CGTTGACCGT TTGCCTGCTG TTACTCCTCG CCCCCGCCTT CCATCTCGCC
GCCGCTCAAG CGCCTGCGGC TAAACAAGAA CCTGCGGCTA AGCAACAAGT GCCCTTAACC
CAACAAGAGG CCTTGCCCCA CTCCCAGACG CCTATCCTCG ACCGTCCCCT GGTGGAGCGT
TACATACTGG ATGAACTCAA GGCATTGAGG ATGGAGCAGC AAGATCTCGA GCGCCGCCTG
ACGGTGGAGA TCACCGACCG TGAGCTGGCG GTGGCCGACA AGTCGCTGAA CTATGCCAAC
GTGACGGTAA CCTACTTCTT CTACATCATC GCGGGTGTCG CATCCTTGAT CGCCTTCATC
GGCTGGCAGT CGCTTAGAGA GATCAAGACC AACACCGCCA AGTTGGCGGC CGAGCAGCTG
CAATCCATCA CAGAGCAATA CGAGGAGAAG TTTAAGGTAC TGGAGCAAGA CCTTAAGCGT
AAGAGCCGCA TCATCACCAA GAACAACCGC GAGATCGAGA TCATCAACGA GATCCACACC
CTCTGGCTAC ACGCCCAAAG TGCCCAGACC CCAGAGCAGA AGATCGCCGT CTATAACGAG
ATCCTCACCA TACGCCCGGG AGACCTCGAG GCGATGACCT ACAAGGCCGA TGCCGCCATG
GAGATGCGCG AGTTTAACTG GGCGCTGAGC CTATGTAACC GGGTGCTTGA GGTCGACGGC
AGCAACGCGC ACGCCCTCTA TCAGCGCGCC TGCGCCTTCG CCTGTCTGGG CCAGGAGGAG
CGCGCCCTGT CGGATCTTGA GCAGGCTATA GAAAACAGCG TCTCCTTCAA GGAGGTGGCC
GCCAACGAGG ACGACTTCAG CAACCTGAGA AGCAACCCCA GGTTCGACAT ACTGATCTCC
TCCAGCGAGA GCTAA
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| Protein sequence | MLRSLTVCLL LLLAPAFHLA AAQAPAAKQE PAAKQQVPLT QQEALPHSQT PILDRPLVER
YILDELKALR MEQQDLERRL TVEITDRELA VADKSLNYAN VTVTYFFYII AGVASLIAFI
GWQSLREIKT NTAKLAAEQL QSITEQYEEK FKVLEQDLKR KSRIITKNNR EIEIINEIHT
LWLHAQSAQT PEQKIAVYNE ILTIRPGDLE AMTYKADAAM EMREFNWALS LCNRVLEVDG
SNAHALYQRA CAFACLGQEE RALSDLEQAI ENSVSFKEVA ANEDDFSNLR SNPRFDILIS
SSES
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