| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0871 |
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| Symbol | obgE |
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| ID | 4924228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 991355 |
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| End bp | 992518 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162404 |
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| Product | GTPase ObgE |
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| Protein accession | YP_001093002 |
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| Protein GI | 127511805 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0536] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR02729] Obg family GTPase CgtA |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0184633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTTG TCGATGAAGC CGTGATCAGA GTCGAAGCTG GTGATGGCGG TAGTGGTTGC
GTTAGTTTTC GACGCGAAAA GTATGTGCCC GATGGCGGCC CAGATGGCGG TGACGGTGGT
GACGGCGGCA GTGTTTATCT GCAAGCCGAT GAAAACCTCA ACACCCTGAT CGATTACCGT
TTCGAGCGTT TCCATTTTGC CGAGCGTGGC GAGAATGGTC GTGGTCGCGA CTGTACCGGT
CATGGCGGTA AAGATCTTAT CCTTAAGGTG CCAGTCGGGA CCCGCGCCGT CGATGAAGAG
ACCCAGGAAG CCCTTGGGGA TCTCAAGACC CATGGTCAGA AGCTGTTGGT GGCTAAAGGT
GGCTTCCATG GCCTGGGTAA CACTCGCTTT AAGAGCAGTA CCAACCGCGC GCCGCGTCAG
AAGACCCTGG GCACCCCAGG TGAAGTGCGT AGCCTGAGAC TCGAGCTGAT GCTGTTGGCG
GATGTGGGTC TGCTGGGTAT GCCTAACGCC GGTAAGTCGA CCTTCATTCG CTCTGTGTCT
CGTGCCAAGC CGAAGGTTGC CGATTATCCA TTTACGACTC TGGTGCCTAA CCTAGGGGTT
GTGACACCAA GACATGGCCA AAGCTTCGTG ATCGCCGATA TTCCCGGTCT GATCGAAGGC
GCCGCCGAAG GGGCTGGCCT GGGTATTCGC TTCCTTAAGC ACCTCGAGCG TTGCCGTGTG
CTGCTGCATA TCCTGGATAT CGAGCCTATC GATGGCAGCG ATCCCGTCGA CAGCGCCCGC
GCCATCGTGG GTGAACTAGA GAAGCACTCG CCGCTGCTGG CCAGCAAGCC ACGTTGGTTG
GTGTTCAACA AGACTGACCT GCTGCTCGAA GAGGAGCTGC AAGAGCGCGT CGATCGCATC
GTCAAAGAGC TGGACTGGCA GGGCGATGTC TACTGTATTT CGGCCTACAA CCGCGAAGGC
ACGCAGGAAC TGGCACTCAA GCTGATGGAC TTTATCGATG CTCTGCCACC AGAGGTCGAG
GAAGATCCCG ATGCAGAGGT CGAGTTCAAG TGGGACAACT ATCATCAGAA GACCCAGGAA
GTGGTCAACG AAGACTATGA TGATGACTTC GACGACGACT TCGATGATGA TGACTATGAT
GTCGAAATCA TCTATCAAAG GTAA
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| Protein sequence | MKFVDEAVIR VEAGDGGSGC VSFRREKYVP DGGPDGGDGG DGGSVYLQAD ENLNTLIDYR
FERFHFAERG ENGRGRDCTG HGGKDLILKV PVGTRAVDEE TQEALGDLKT HGQKLLVAKG
GFHGLGNTRF KSSTNRAPRQ KTLGTPGEVR SLRLELMLLA DVGLLGMPNA GKSTFIRSVS
RAKPKVADYP FTTLVPNLGV VTPRHGQSFV IADIPGLIEG AAEGAGLGIR FLKHLERCRV
LLHILDIEPI DGSDPVDSAR AIVGELEKHS PLLASKPRWL VFNKTDLLLE EELQERVDRI
VKELDWQGDV YCISAYNREG TQELALKLMD FIDALPPEVE EDPDAEVEFK WDNYHQKTQE
VVNEDYDDDF DDDFDDDDYD VEIIYQR
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