| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0851 |
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| Symbol | |
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| ID | 4923231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 974065 |
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| End bp | 975117 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640162384 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_001092982 |
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| Protein GI | 127511785 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000978996 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATTATC AAACTGATGA CGTTCGCATT AATAAAATTA AAGAGTTGTT ACCCCCTGTC
GCTATCCTCG AGCGATTTCC GGCAAGCGAA AATGCATCGG CAACAGTGTT TAACGCGCGG
CAGAATATTC ACAATATCCT GAAAAAAGAA GATGATCGTC TGTTGGTGAT CATCGGGCCT
TGTTCTATCC ACGACCCTAA GGCGGCGCTG GAATATGGTG AGAGACTCGC CAAATTGCGC
GAGCAATATA AGGATCAACT CGAGGTCGTG ATGCGCGTCT ATTTCGAGAA ACCGCGCACC
ACAGTGGGCT GGAAGGGCCT GATCAACGAC CCTTACATGG ACAATAGCTT CAAGCTGAAT
GATGGCCTGC GCACAGCTAG AAAACTGCTA TTAGATCTCA ATGAGTTAGG CGTGCCGACC
GCGGGTGAAT TTTTAGATAT GATCACGCCT CAATATGTGG CGGATCTCAT GTGTTGGGGC
GCTATCGGTG CTCGCACCAC AGAATCACAG GTACACAGAG AGCTGGCATC TGGCCTCTCT
TGCCCCGTCG GTTTTAAGAA TGGTACCGAT GGCACCATCA AGGTGGCTAT CGATGCTATT
GGCGCCGCCA GTGCGCCGCA CCATTTCCTG TCGGTGACCA AGTATGGCCA TTCGGCGATC
GTCTCCACCA AGGGCAATCC TGATTGTCAC ATCATTCTGC GTGGTGGCAA GGAGCCTAAC
TATAGCGCCG AGCACGTGCA GGCGATCAGC GAGCAGTTGG CTAAAGCTAA CCTGCCGCAA
AATATCATGG TGGATTTTAG CCATGCTAAC AGCAGCAAAC AGTTTAAGCG CCAGATGCTG
GTGGGCGAAG ATGTGGCCAG CCAGGTGAGC GCCGGTGAGC GGGCGATTTT CGGTGTGATG
GTTGAGAGTC ACCTGGTTGA GGGACGTCAG GACTATATCG AAGGGCAGCC GTTGTGTTAC
GGCCAGAGCA TCACAGATGC CTGTATCGGT TGGGAAGATA CCGAAACCTT GCTGGCAAAT
TTGAATCGGT GTGTGCTCGA GCGCCGCAGC TAA
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| Protein sequence | MYYQTDDVRI NKIKELLPPV AILERFPASE NASATVFNAR QNIHNILKKE DDRLLVIIGP
CSIHDPKAAL EYGERLAKLR EQYKDQLEVV MRVYFEKPRT TVGWKGLIND PYMDNSFKLN
DGLRTARKLL LDLNELGVPT AGEFLDMITP QYVADLMCWG AIGARTTESQ VHRELASGLS
CPVGFKNGTD GTIKVAIDAI GAASAPHHFL SVTKYGHSAI VSTKGNPDCH IILRGGKEPN
YSAEHVQAIS EQLAKANLPQ NIMVDFSHAN SSKQFKRQML VGEDVASQVS AGERAIFGVM
VESHLVEGRQ DYIEGQPLCY GQSITDACIG WEDTETLLAN LNRCVLERRS
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