| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0790 |
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| Symbol | |
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| ID | 4920936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 902530 |
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| End bp | 903081 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640162323 |
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| Product | hypothetical protein |
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| Protein accession | YP_001092921 |
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| Protein GI | 127511724 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0597866 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAAA CCCTACTCGT CAGCTGTCTC TACATCGGCA TCTTCATCTT CGCCCAGCGT
CTGCTCACCA ACTGGATCGC CAAGCTGGCC GAGTCCAAAC AGGTCTCCTT TAAACGCACC
AAGATGGTAA CCCAATATAT TACCTACCTG CTGTTTATCA TCATCGCCTG TCTCTGGGTG
ATCTCACTCG GCATCGAATA TCAGCAGGTC TCGCTGTTTA TCTCCTCGGT ATTTGCCGTG
CTCGGCGTGG CCTTGGTGGC CCAGTGGTCG ATTTTGAGTA ACATCACCGC CGGGATCTTG
ATCTTCTTCG TCTTCCCCTA CCGTATTGGC GATCGCATCA AGATTATCGA CAAGGATGAA
GATGTTAGCG GCATCATCGC CGAGATCAGT CTGTTTCACG TGCTGATCGA GCGCAGCGAC
GGCATCACCA TCACCTACCC TAACAACCTG ATGCTACAGA AAGGGGTTTT GAAACTGACT
CAGGCGCACA CTCAGGCCAA GCCCTTGAGC GAATCGCCCG AGAAAGACCA TACTCAAGTA
CAAAGCGATT AA
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| Protein sequence | MTQTLLVSCL YIGIFIFAQR LLTNWIAKLA ESKQVSFKRT KMVTQYITYL LFIIIACLWV
ISLGIEYQQV SLFISSVFAV LGVALVAQWS ILSNITAGIL IFFVFPYRIG DRIKIIDKDE
DVSGIIAEIS LFHVLIERSD GITITYPNNL MLQKGVLKLT QAHTQAKPLS ESPEKDHTQV
QSD
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