| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0724 |
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| Symbol | |
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| ID | 4923215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 823446 |
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| End bp | 824756 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162257 |
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| Product | hypothetical protein |
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| Protein accession | YP_001092855 |
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| Protein GI | 127511658 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCTAT ATTACGTCGA TCTGGCCTGG CGCAGCATAC GCAAGACGCC GATTCTGTCG
CTGCTCATGG TGCTGGCCAT CTCTGTGGGG ATAGGCATCA CCATCACCAC GCTTAACGTC
TACAGCATGA TGGCCTATAA CCCGGGCGGT GAGCGCTCCG AGCAGCTCAA CGCGATTCAG
CTCTGGTCAC AGGGACCGGA TTCCTGGGAC GACTTTCATC GCTTGGTCAC CTATCAGGAT
GCGATGAACC TGCGTAAGGG CAATGTGGCT AAGGCCCAGG CGGCCATGTT CCGTAGCGGC
ATGGCGGTGC AGACAGACGA CCCTGAGGTG TTGCCAAGGT TGCAGGGCAT CAGGGTGACC
GATGGCGACT TCTTCAAGAT GTTTGAGGTG CCTTTTATCT ATGGCAATCG CTGGGACAAG
GCGGTGGATC TGGACCCTGC CTATCAGGCG GTGATCGGTG AGAAACTTAA CCAGAAGCTG
TTTGGCGGCG AGAATAGCGT CGGCAAGACC ATCTACCTCA ACCGCAAGCC CTATCAGGTG
GTGGGTGTGA TCGGCGACTG GAATCCTCAG CCTAAGTATT ACGATCCGAC CAGTGGCGCC
TTCGCCAAAT CGGAGCAGAT CTATATTCCA TTTTCGCTGG CGGCAAACGA AGAGTTTAGC
GTCTGGGGCA ACTCGTCGGG TTGGAAACAT GAGCCGATGA ACAACTATCA GGACAGGTTG
AATTCGGAGA AGGTGTGGTT GGAGTACTGG ACCTATCTGC CGACGAGTGA AGATCGCGCC
GCCTACAAGA GCTATCTGGC CAACTATGTG GAGCAGCAGA AGGAGCTGGG CCGTTTCACC
GATAACAAGT CACCTGTCGA CTCTGTGCTC ATGTCAGATG TCGCCGACTG GTTGGAGCGC
AGCCATGTGG TGCCTGAAGA TAACAAGATT CTGGTGGGAC TGAGCGCCTT GTTCCTCAGC
GTCTGTCTGG TGAACATCCT CGGCCTGATG CTGACCAAGT TTCTCAAGCG TGCGCCCGAG
GTGGGTGTCA GACGAGCCAT CGGCGCCAGC CGGGCACAGA TCTTCTCTCA GTACATGGTG
GAAGTGGGCG TCATCGGCCT GTTTGGTGGC CTGGTGGGAC TGCTATGGGC CTGGGGCGCG
CTTTACGCCC TGTCGGCACG CTTCGGCGTC GCCGAGGGAT TGACCCATCT CTCGATGAGC
ATGTGGTTGA TCACCCCAAC CATCGCCGTG GGTACCGCGC TGCTGGCCGG ACTCTATCCT
GCCTGGGTGG TGTGTCGCAC TAAACCAAGT GTCTACTTGA AGAGCCAATA A
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| Protein sequence | MFLYYVDLAW RSIRKTPILS LLMVLAISVG IGITITTLNV YSMMAYNPGG ERSEQLNAIQ
LWSQGPDSWD DFHRLVTYQD AMNLRKGNVA KAQAAMFRSG MAVQTDDPEV LPRLQGIRVT
DGDFFKMFEV PFIYGNRWDK AVDLDPAYQA VIGEKLNQKL FGGENSVGKT IYLNRKPYQV
VGVIGDWNPQ PKYYDPTSGA FAKSEQIYIP FSLAANEEFS VWGNSSGWKH EPMNNYQDRL
NSEKVWLEYW TYLPTSEDRA AYKSYLANYV EQQKELGRFT DNKSPVDSVL MSDVADWLER
SHVVPEDNKI LVGLSALFLS VCLVNILGLM LTKFLKRAPE VGVRRAIGAS RAQIFSQYMV
EVGVIGLFGG LVGLLWAWGA LYALSARFGV AEGLTHLSMS MWLITPTIAV GTALLAGLYP
AWVVCRTKPS VYLKSQ
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