Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0720 |
Symbol | |
ID | 4921967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 820401 |
End bp | 820787 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640162253 |
Product | hypothetical protein |
Protein accession | YP_001092851 |
Protein GI | 127511654 |
COG category | [S] Function unknown |
COG ID | [COG3686] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGACTA TGCTACTGGC CTGCCTACTC TTTGCCATGT TGCTTCCCTA CCTGGCCAAG GTGCCCGTGG CCATGGCGAT GGCCAAGCAG GGGGGCTATG ACAACGCCTA TCCCAGAAGC CAGCAGGCTC AGCTGACCGG CTTCGGCGCC CGCGCCTTGG CAGCACATCA GAACGCCTTC GAGTCCCTGC TGATCTTCGC CGTGGCGGCG CTGACCGTGA TCGCACGGGA CAAGGTCGAC GACACAGTTG GTCTGTTAGC CCTTGTGCAT GTGCTGGCAA GATGTGCCTA TCATCTCCTC TACCTGCTGG ATAAGAGCAC CCTGCGTTCG CTTTCCTGGT TCGTGGCCAT TATCGCCGCC TTCGCCATCT TCGCCCGGGC GTTTTAA
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Protein sequence | MMTMLLACLL FAMLLPYLAK VPVAMAMAKQ GGYDNAYPRS QQAQLTGFGA RALAAHQNAF ESLLIFAVAA LTVIARDKVD DTVGLLALVH VLARCAYHLL YLLDKSTLRS LSWFVAIIAA FAIFARAF
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