Gene Shew_0720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0720 
Symbol 
ID4921967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp820401 
End bp820787 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content60% 
IMG OID640162253 
Producthypothetical protein 
Protein accessionYP_001092851 
Protein GI127511654 
COG category[S] Function unknown 
COG ID[COG3686] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACTA TGCTACTGGC CTGCCTACTC TTTGCCATGT TGCTTCCCTA CCTGGCCAAG 
GTGCCCGTGG CCATGGCGAT GGCCAAGCAG GGGGGCTATG ACAACGCCTA TCCCAGAAGC
CAGCAGGCTC AGCTGACCGG CTTCGGCGCC CGCGCCTTGG CAGCACATCA GAACGCCTTC
GAGTCCCTGC TGATCTTCGC CGTGGCGGCG CTGACCGTGA TCGCACGGGA CAAGGTCGAC
GACACAGTTG GTCTGTTAGC CCTTGTGCAT GTGCTGGCAA GATGTGCCTA TCATCTCCTC
TACCTGCTGG ATAAGAGCAC CCTGCGTTCG CTTTCCTGGT TCGTGGCCAT TATCGCCGCC
TTCGCCATCT TCGCCCGGGC GTTTTAA
 
Protein sequence
MMTMLLACLL FAMLLPYLAK VPVAMAMAKQ GGYDNAYPRS QQAQLTGFGA RALAAHQNAF 
ESLLIFAVAA LTVIARDKVD DTVGLLALVH VLARCAYHLL YLLDKSTLRS LSWFVAIIAA
FAIFARAF