Gene Shew_0708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0708 
Symbol 
ID4923811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp801959 
End bp802786 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content56% 
IMG OID640162241 
Producthypothetical protein 
Protein accessionYP_001092839 
Protein GI127511642 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTCA CACTCACCCC GAGCAATGCG CTCGAAACCG CCCTGCAGGC GGCACTTGCC 
GATCACACCC AGGCCAAAGC CCTCTATGAA CAGCTGATCA AGGCCAGGCT CTACCTGCTG
AGCGATGGCC AAGAAGCTCC TCAGGCCGAT GGCACCACTG AGCTCTCCAT CATGCAATGG
CACATTCCCG TCAGCGATGA TCAGGTGCAC TACTTCGTCC CGCTGTTTAC CTCCCAGGAG
GCAGTCGATC AGGCCAAGGC CATAATGGAG AGTGAGGGCA GCGAATTTCA CGGTCAGATT
GAGATAGATG CGCCTCAGGC ATTTCAGCTG CTGCTGAGCA ACCAGATGGA TATGGCACTC
AACCCCAATA GCAATCTATC GAAAGTCGTC AGCAGCGATG AGATCCGCTA TATGTTGCTG
CCCGACATGG CGCTACTCCC CCAGGGCAAT CAGCTCCTGC TGCTGGGCAA GGTTCTTGAT
GATGGGCTGC CCATGTTTGG CGCGGTGCAC CAAATATTGG CTAACTACCC CAGCGTCAAG
GCGGGCTATT TCATCGAGTC ATGCGAGCTG GATATCCGCC GCGGCGGCAC AGACAGCGCC
TTCACCCTGG CGCTCACCTT GGAGGGAGAC AGGATTAGCG ATGATTTCAG CCGCATTCGC
AGCGATTGCC GCAACCTACA TAGAGAGATT GAGCTTCATG GCTGGGAGAT ACGCCCCTAC
CTGCTGAGAA GTGACAAACA TGATGAGATA AGCGACTTTT GCCTGAAGAA GCTTGAGCCC
TTCTATCGCC CTTCGCTGCT GAGCAAATTC AAGACCTGGT TTAGCTGA
 
Protein sequence
MEVTLTPSNA LETALQAALA DHTQAKALYE QLIKARLYLL SDGQEAPQAD GTTELSIMQW 
HIPVSDDQVH YFVPLFTSQE AVDQAKAIME SEGSEFHGQI EIDAPQAFQL LLSNQMDMAL
NPNSNLSKVV SSDEIRYMLL PDMALLPQGN QLLLLGKVLD DGLPMFGAVH QILANYPSVK
AGYFIESCEL DIRRGGTDSA FTLALTLEGD RISDDFSRIR SDCRNLHREI ELHGWEIRPY
LLRSDKHDEI SDFCLKKLEP FYRPSLLSKF KTWFS