| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0707 |
|---|
| Symbol | |
|---|
| ID | 4923541 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 801362 |
|---|
| End bp | 801841 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640162240 |
|---|
| Product | YbaK/prolyl-tRNA synthetase associated region |
|---|
| Protein accession | YP_001092838 |
|---|
| Protein GI | 127511641 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2606] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATTT CAAACCGCTT AAATCACTAC CTGGCGGAAC ATGAAGTGAA CTATGAGATA
GTGCTGCACC GCCACAGCCA CAACTCTATC AGTTCGGCCA TTGCCGCCCA GCTGGCCCCC
GCCCAAGTCG CCAAGGGGGT GATTCTGGAG GATCATCAGG GACGCAGAGT CATGGCTGTG
CTCCCCACCA ATCATAAGAT CAACCTCAAG GCGCTGGGCG ACAAGCTCAA CCGCGATCTG
CATCTGGTGA AGGAGCAAAC CGTCTATCAG ATGTTTGACG ATTGCGAGCA TGGCGCCATC
CCCTCCCTCG GCGCGGCCTA CAATATCGAG ACCATCTATG ACGACCTACT GATCGAGGCC
AAGGAGCTCT ACCTAGAGGC CGGCGATCAC ACCAGCCTGG TCAGGCTCAG CCGCGAAGAT
TTCATCAAGC TGATCAAAGA CGCAAAACAC CTGAGATTCA GCTATCAGAG CATCCACTAG
|
|---|
| Protein sequence | MSISNRLNHY LAEHEVNYEI VLHRHSHNSI SSAIAAQLAP AQVAKGVILE DHQGRRVMAV
LPTNHKINLK ALGDKLNRDL HLVKEQTVYQ MFDDCEHGAI PSLGAAYNIE TIYDDLLIEA
KELYLEAGDH TSLVRLSRED FIKLIKDAKH LRFSYQSIH
|
|---|
| |