| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0662 |
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| Symbol | |
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| ID | 4922361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 752204 |
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| End bp | 753586 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640162195 |
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| Product | NAD(P) transhydrogenase, beta subunit |
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| Protein accession | YP_001092793 |
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| Protein GI | 127511596 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1282] NAD/NADP transhydrogenase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.373641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00135879 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTATGA CGATTATCTA TCTCGCCTAC CTTGTGGCTG CGAGTCTGTT TATTTTAGGG
ATCAAGGGGC TGACCAAGCC ACGTACCGCT GTGCGTGGTA ACCAGTTGTC GGCCCTGGGT
ATGTTTATCG CCGTGGTGGT CACTCTGCTG GATAAGAGCA TCCTAAGCTA TGAGTGGATC
ATCGCAGGTA TCTTGCTGGG GGGGGCCATA GGCGCCGTGA TGGCCACCAA GATCCAGGTG
ACCGCCATGC CGCAGATGGT GGCCCTGCTC AACGGTTTCG GTGGCGGCGC CTCGCTGTTT
ATCGCCCTGG CGAGCTTCCT GGATCCCGAT TCGGCGACTC ATGTGGTGGC GCTGATCTCC
ATCGGTCTGA CCGTGCTCAT CGGCTCGGTG ACCCTGTCGG GCTCCTTCGT GGCGTTTGCT
AAGCTGCAGG AGCTGATCTC GGGTAACCCA ATCCGGGTAC CGGGCAACAA GTTTATCAAT
GCTAGCCTGT TAATCGCCGC CCTGGTGCTA ACGGTTGCCG TGGTCACCAC GCCGAGCAAT
CCGACCTTCA TCTATGCCTT GGTAGCCGTA TCGCTATTAC TGGGTCTCTT CCTGGTGGTG
CCTATCGGCG GCGCCGACAT GCCAGTGGTT ATCGCTCTGC TGAACTCCTA CTCGGGGATC
GCGGCGGCCA CCACAGGTTT TATCACCGGC AACACAGTAC TGATCGTCTC GGGTTCTCTG
GTTGGCGCCT CGGGCATCAT CCTGACTCAG ATCATGTGTA AGGCGATGAA CCGCTCACTG
TTTAACGTGC TCTTTGGCGT CATGGCCGAA GGTGGCGAGA CGGTAGATGC CGACGAGGTC
TATGCGGGTA AGGTGACCTC CTCCTCGCCG GAAGAGGTGG CCATGCTGCT GGAAACCGCA
GAGCGCGTGG TGATCGTCCC TGGTTATGGT CTGGCGATGG CTCAGGCGCA ACATGCGGTG
CGCGAGTTGG CCTCGGTACT GGAGGCACGC GGCGCCCAGG TGCTGTACGC CATCCACCCG
GTTGCCGGTC GTATGCCTGG CCACATGAAC GTGCTACTGG CCGAAGCCGA GGTGCCCTAT
GAGCAGCTGA TCGAGATGGA TGAGATCAAC CCCCAGTTCG AACAGACAGA CGTGGCCATC
GTCATCGGTG CCAACGACGT GACCAACCCT ATGGCACGTG AAGACAAGGG CAGCCCTATT
TACGGCATGC CGATTCTCAA CGTCGACAAG GCCCGTACCG TGGTGGTCGT CAAGCGCTCA
CTCAGCCCAG GTTTCGCCGG TCTGCCTAAT CCGCTGTTTG CCAAGGACAA CGCCCTGATG
TTGTTTGGCG ATGGTAAGAA GGCGATTGTC GATCTGACCC AGTCCCTCAA AGAAGCGGAC
TAA
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| Protein sequence | MSMTIIYLAY LVAASLFILG IKGLTKPRTA VRGNQLSALG MFIAVVVTLL DKSILSYEWI
IAGILLGGAI GAVMATKIQV TAMPQMVALL NGFGGGASLF IALASFLDPD SATHVVALIS
IGLTVLIGSV TLSGSFVAFA KLQELISGNP IRVPGNKFIN ASLLIAALVL TVAVVTTPSN
PTFIYALVAV SLLLGLFLVV PIGGADMPVV IALLNSYSGI AAATTGFITG NTVLIVSGSL
VGASGIILTQ IMCKAMNRSL FNVLFGVMAE GGETVDADEV YAGKVTSSSP EEVAMLLETA
ERVVIVPGYG LAMAQAQHAV RELASVLEAR GAQVLYAIHP VAGRMPGHMN VLLAEAEVPY
EQLIEMDEIN PQFEQTDVAI VIGANDVTNP MAREDKGSPI YGMPILNVDK ARTVVVVKRS
LSPGFAGLPN PLFAKDNALM LFGDGKKAIV DLTQSLKEAD
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