| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0617 |
|---|
| Symbol | |
|---|
| ID | 4923266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 701995 |
|---|
| End bp | 703263 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640162150 |
|---|
| Product | phosphate transporter |
|---|
| Protein accession | YP_001092748 |
|---|
| Protein GI | 127511551 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0306] Phosphate/sulphate permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00080606 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGATG TATTAATCAC CAATGGCCCG TGGCTAATTG CCATTGCGGC TGCATTTGGA
TTTTTAATGG CGTGGGGTAT TGGCGCAAAC GATGTCGCTA ATGCTATGGG AACCTCAGTA
GGTTCAAACG CGATCACCAT TAAACAAGCG ATCATCATCG CGATGATCTT CGAATTTGCC
GGCGCGTACC TCGCAGGCGG TGAAGTAACC AGCACGATCC GTAAAGGGAT CATAGATTCG
GCCTATTTTG TCGACTCACC TGAGCTGCTG GTGTACGGCA TGATCTCGGC GCTACTGGCT
GCCGGTATCT GGTTGGTTGT CGCGTCAGCC CTGGGCTGGC CGGTATCGAC CACTCACTCT
ATCGTCGGCG CTATCGTAGG TTTTGCCGCC GTGGGTGTGA GCGCCGATTC TGTTGCCTGG
AGCAAGGTAT TGGGTATCGT GGGGTCATGG ATCATCACAC CGGCGATCTC TGGCTTTATC
GCCTTTACCA TCTTCCAAAG CGTACAGAAG CTGATCTTCA ACACTGACAA CCCGCTGGAA
AACGCCAAGC GTTACGTGCC TTTCTATATG GCACTGGCCG GTTTCGTCAT GTCGCTGGTG
ACCATCAAGA AGGGTCTGAA GCACGTAGGT CTGCACTTCA CCAACGTCGA AGCCTACTCA
CTGGCGGTCT TTATTGCGAT CCTGGTGGGC ATTGGCGGTA TGATTGCCAT CAGACGTCTA
AAGATGAGCC AGAGCGCCGA TCGTCAGACG CAGTTTGGTA ACGTGGAGAA GGTATTCGCT
ATTCTGATGG TTGTGACCGC TTGTTGTATG GCGTTCGCCC ACGGTTCTAA CGATGTCGCC
AACGCTATTG GCCCTCTGGC CGCCGTGGTA TCCGTGGTAA ATAGCGGTGG CGAGATCGCC
AGCAAGGCTG AATTAGTCTG GTGGATCCTA CCACTAGGTG CCTTCGGTAT TGTCATGGGT
CTGGCTATCT TCGGTAAGCG TGTGATGCAG ACTATCGGTA AGAACATCAC TCACCTGACA
CCTAGCCGTG GTTTTGCCGC CGAGCTGGCT GCCGCCTCTA CCGTGGTTAT CGCCTCGGGT
ACGGGTCTGC CTATCTCGAC CACTCAGACA CTGGTTGGTG CCGTGTTGGG TGTGGGTATG
GCGCGTGGTA TCGCCGCCAT CAACATCGGC GTGGTACGTA ACATCGTGGT CTCTTGGGTA
GTCACACTAC CTGCGGGCGC GGGCCTGTCG ATCATCTTCT TCTTCATGAT CAAGGGGATC
TTTAGCTAA
|
|---|
| Protein sequence | MVDVLITNGP WLIAIAAAFG FLMAWGIGAN DVANAMGTSV GSNAITIKQA IIIAMIFEFA
GAYLAGGEVT STIRKGIIDS AYFVDSPELL VYGMISALLA AGIWLVVASA LGWPVSTTHS
IVGAIVGFAA VGVSADSVAW SKVLGIVGSW IITPAISGFI AFTIFQSVQK LIFNTDNPLE
NAKRYVPFYM ALAGFVMSLV TIKKGLKHVG LHFTNVEAYS LAVFIAILVG IGGMIAIRRL
KMSQSADRQT QFGNVEKVFA ILMVVTACCM AFAHGSNDVA NAIGPLAAVV SVVNSGGEIA
SKAELVWWIL PLGAFGIVMG LAIFGKRVMQ TIGKNITHLT PSRGFAAELA AASTVVIASG
TGLPISTTQT LVGAVLGVGM ARGIAAINIG VVRNIVVSWV VTLPAGAGLS IIFFFMIKGI
FS
|
|---|
| |