Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0601 |
Symbol | |
ID | 4923934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 680283 |
End bp | 680669 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640162134 |
Product | hypothetical protein |
Protein accession | YP_001092732 |
Protein GI | 127511535 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.778278 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAAGT TGAAAAAAGG GAATTTATTC ACGCGAACAG AGATACAGCA GCTAGTTGGT GGTGAAATAC AAACATACCT ACCTCAGAAA AATAAAGTGA TTTTAGCTGG GTGTTTTAAC CGAAAATTAA ATCCTGATTG CCCAACGGAA GTTCAAGCTG GCAACGCTAA AAAAGTAACT CAAAAGGCAG CTTTACTAAT TAGCCAACCA AATACTATTT TTCCGGTTTT CACCAAAGGA TCTGATACAG ACAAACACTA TGAGTTTATC GGAATGTACC GTTGTACAGG AGGAACAAAT GCTCCAAAAG TCCTTGCTCA AGCAGAGAAG AAATCAGGAC GAATCGATCA GTTGTCATAC GTTTTCCAAC TTGAGAACGT TACTTAA
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Protein sequence | MDKLKKGNLF TRTEIQQLVG GEIQTYLPQK NKVILAGCFN RKLNPDCPTE VQAGNAKKVT QKAALLISQP NTIFPVFTKG SDTDKHYEFI GMYRCTGGTN APKVLAQAEK KSGRIDQLSY VFQLENVT
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