Gene Shew_0601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0601 
Symbol 
ID4923934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp680283 
End bp680669 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content38% 
IMG OID640162134 
Producthypothetical protein 
Protein accessionYP_001092732 
Protein GI127511535 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.778278 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAGT TGAAAAAAGG GAATTTATTC ACGCGAACAG AGATACAGCA GCTAGTTGGT 
GGTGAAATAC AAACATACCT ACCTCAGAAA AATAAAGTGA TTTTAGCTGG GTGTTTTAAC
CGAAAATTAA ATCCTGATTG CCCAACGGAA GTTCAAGCTG GCAACGCTAA AAAAGTAACT
CAAAAGGCAG CTTTACTAAT TAGCCAACCA AATACTATTT TTCCGGTTTT CACCAAAGGA
TCTGATACAG ACAAACACTA TGAGTTTATC GGAATGTACC GTTGTACAGG AGGAACAAAT
GCTCCAAAAG TCCTTGCTCA AGCAGAGAAG AAATCAGGAC GAATCGATCA GTTGTCATAC
GTTTTCCAAC TTGAGAACGT TACTTAA
 
Protein sequence
MDKLKKGNLF TRTEIQQLVG GEIQTYLPQK NKVILAGCFN RKLNPDCPTE VQAGNAKKVT 
QKAALLISQP NTIFPVFTKG SDTDKHYEFI GMYRCTGGTN APKVLAQAEK KSGRIDQLSY
VFQLENVT