| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0579 |
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| Symbol | |
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| ID | 4923841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 656549 |
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| End bp | 657568 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162112 |
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| Product | arginine N-succinyltransferase |
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| Protein accession | YP_001092710 |
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| Protein GI | 127511513 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3138] Arginine/ornithine N-succinyltransferase beta subunit |
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| TIGRFAM ID | [TIGR03243] arginine and ornithine succinyltransferase subunits
[TIGR03244] arginine N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.934676 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAATTA TCCGCCCCAT ACGATCGAGC GATTTCGATG CCTTGTATCA GATCGCCATC
GAGTCAGGTC ATGGATTCAC GTCTTTACCC GTCAATGAAG AACTATTAAG AAATAAGATT
GCCCGCGTCG AGGCCTCGTT CGTTAAAGAG ATCGAGAAGC CGTTCGACGA GGGCTATCTT
ATGGTGCTGG AAGACACAGA GACTGGCGAA GTGGTCGGTA CCTGTGGCCT CGAGGCCGCG
GTCGGCATGG TCGATGCGTT TTATCACTAC CGTCTGGGCA CAGAGGTCTA CTACTCTGAG
CAGATCGACG TGCGCAACGA GGTGGAAACC CTGACCCTGT GTCACGACTA CACGGGCGCC
GCCGAGCTAT GTACCCTGTT CCTGCGCGAC ACCTACCGTA AGAACAACAA CGGGCGCATG
CTGTCTCGCA GCCGTTTCCT GTTCCTGGCA CAGCACGCCG AACGCTTTGG CGACACAGTG
ATCGCCGAGA TGCGCGGCGA GAGCGACGCC GAGGGCAACT CACCTTTCTA TGGCTGGCTG
CAGAAGAACT TCCTCGGCAT CGACTTCGTG CAGGCCGACT ACCTGTCGGG CCTGGGTCAG
AAGGCCTTCA TGGCCGAGAT GATGCCGAAA AACAGCGTCT ATGTCTGTCT GCTGCCCGAA
GAGGCGCAGA AGGTGATCGG CGAGGTGCAC ACCAACACTC GTCCTGCGCT TAACCTGTTA
CAGGCAGAGG GCTTTAGATG CCGTGGCTAT GTGGATATCT TCGACGGCGG TCCAACGGTC
GAGTGCAATC TTAACGATAT TCGTTCGGTG AGAGAGAGCC GTCTGCTGAC GGTCAAGGTG
GGCGAGATGC CTGTCTCGAG CAGCAGTTTT ATTATCTCAA ATACTTTGTT AGCGGGTTAC
CGCGCCACCT CGGCCAACTT GATGGTCAGC GATGAAACCG ATGAGGTGAT CCTGTCACCC
GAGCTCGCCG GTGCGCTGCT GGTGGCCGAA GGCGAACAGA TCCGTGTCTT GGCAATGTAG
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| Protein sequence | MLIIRPIRSS DFDALYQIAI ESGHGFTSLP VNEELLRNKI ARVEASFVKE IEKPFDEGYL
MVLEDTETGE VVGTCGLEAA VGMVDAFYHY RLGTEVYYSE QIDVRNEVET LTLCHDYTGA
AELCTLFLRD TYRKNNNGRM LSRSRFLFLA QHAERFGDTV IAEMRGESDA EGNSPFYGWL
QKNFLGIDFV QADYLSGLGQ KAFMAEMMPK NSVYVCLLPE EAQKVIGEVH TNTRPALNLL
QAEGFRCRGY VDIFDGGPTV ECNLNDIRSV RESRLLTVKV GEMPVSSSSF IISNTLLAGY
RATSANLMVS DETDEVILSP ELAGALLVAE GEQIRVLAM
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