| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0567 |
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| Symbol | |
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| ID | 4922568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 642471 |
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| End bp | 643769 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640162100 |
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| Product | GTP-binding protein, HSR1-related |
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| Protein accession | YP_001092698 |
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| Protein GI | 127511501 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2262] GTPases |
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| TIGRFAM ID | [TIGR03156] GTP-binding protein HflX |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.102684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.249219 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTTGAAC GCTATGAGGC GGGAGAAGCT GCAGTACTTG TCCATATCGA CTTTTCAGAT
GAAGACAGTA GGGAAGATAT TACCGAACTT CGTTTATTGG TCGAATCGGC AGGCGCTGAA
ACCGTTGGCG TGATCACGGG AAGTCGTCGT TCTCCAGATA GAAAGTATTT TGTTGGTACA
GGTAAAGCGG AAGAGTTGGC AGCCATGGTT GCCGCCACTG ACGCCAATGT GGTGATTTTT
AACCACGCCT TGAGTCCTGC ACAAGAGCGT AATCTTGAGC TGATCTGTCA GTGTCGGGTC
TTAGACCGTA CGACGCTGAT TTTGGATATT TTTGCTCAGC GCGCCAGGAC CTATGAGGGT
AAGTTGCAGG TGGAGCTAGC GCAATTGCGC CACATGTCGA CGCGCCTGAT TCGTGGTTGG
ACTCACCTTG AACGGCAAAA AGGTGGTATC GGCCTGCGGG GACCGGGTGA AACCCAGCTG
GAAACCGACA GACGTCTGCT GCGTGGTCGC ATTAAGACCA TCAACAAGCG GCTGGAAAAG
GTCGATAAAC AGCGTGAACA GAGTCGCCGG GCGAGGCAGC GAAGCGAGCT CGCCACCGTG
TCTTTGGTGG GTTACACCAA TGCCGGTAAG TCGACCCTAT TTAACGCCTT GACCGTCTCC
GAGGTCTATG CCGCCGACCA GCTGTTTGCG ACACTCGATC CGACCCTGCG TAAGTTAGAC
TTACAAGACG GTTCGGTCAT TTTGGCCGAT ACGGTCGGTT TCATCAGACA CCTTCCCCAT
GATCTCGTGG CGGCGTTTAA GGCCACCCTG CAGGAAACCC GCGAAGCGGA TCTTCTGCTG
CATGTGGTCG ACAGTGCTGA TGAAAACATG GGCGACAATT TTGAACAGGT ACAGCTGGTA
CTCAAAGAGA TTGGCGCCGA AGAGATTCCA CAGTTGATCG TCTGTAACAA GATAGATCTG
TTGGAAGATG TGGGACCTAA GATCGACTAT GACGGCGATG GGGTCCCTAT ACGTGTTTGG
GTTTCGGCCC AGCAGAGTCT AGGCTTGGAT TTGCTCGAAA AGGCCATCAA CCAGTTGGTT
GGACGGGCCA TATTGGAGCT TACCTTGCGA ATTCCGGCGA CGGCCGGGCA TTATCTTGGT
CAGTTTTATC GACTGGATGT GATACAGCAG AAAGAGTATG ACGATCTGGG GAACTGTATC
TTGTCTGTTC GTTTGTTGGA GGCCGACTGG CACCGATTAG CGAAGCAGAG CCAAGGGGAG
TTGGAAACCT TTATTGTTGA AACCGCAGCA ATAGAGTAG
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| Protein sequence | MFERYEAGEA AVLVHIDFSD EDSREDITEL RLLVESAGAE TVGVITGSRR SPDRKYFVGT
GKAEELAAMV AATDANVVIF NHALSPAQER NLELICQCRV LDRTTLILDI FAQRARTYEG
KLQVELAQLR HMSTRLIRGW THLERQKGGI GLRGPGETQL ETDRRLLRGR IKTINKRLEK
VDKQREQSRR ARQRSELATV SLVGYTNAGK STLFNALTVS EVYAADQLFA TLDPTLRKLD
LQDGSVILAD TVGFIRHLPH DLVAAFKATL QETREADLLL HVVDSADENM GDNFEQVQLV
LKEIGAEEIP QLIVCNKIDL LEDVGPKIDY DGDGVPIRVW VSAQQSLGLD LLEKAINQLV
GRAILELTLR IPATAGHYLG QFYRLDVIQQ KEYDDLGNCI LSVRLLEADW HRLAKQSQGE
LETFIVETAA IE
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