| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0522 |
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| Symbol | metF |
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| ID | 4920970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 593019 |
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| End bp | 593909 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640162051 |
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| Product | 5,10-methylenetetrahydrofolate reductase |
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| Protein accession | YP_001092653 |
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| Protein GI | 127511456 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0685] 5,10-methylenetetrahydrofolate reductase |
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| TIGRFAM ID | [TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTTC ATCACGCACA ACACGCCAAT TCATTGAATC AAAGCTTGTC TGAGCTTAAT
GGTGATATCA ATGTGTCATT CGAGTTTTTC CCACCGGCCA CCCCCGAGAT GGAAACCATT
CTGTGGAACT CCATCAGACG CCTGGAGCCG CTCAAGCCTA AGTTTGTCTC GGTAACCTAT
GGTGCCAACT CTGGTGTTCG CGATCGTACC CACGGGGTGA TCGAGCGTAT TCAGAAGGAG
ACAGATCTGG TGGCGGCGCC CCATCTGACC CTGGTCGATG CCAGCGATGA AGAGCTGGTC
GAGCTGGCGA AGCACTACTG GAACTCGGGT ATACGCGACA TAGTTGCGCT ACGTGGCGAT
CTACCCGCGG GCAGTCCTAA GCCGACCCGT TTTGCCAACG ACCTGGTGCG CCTGCTTAAG
TCTGTGGCCG ACTTCGATAT CTCGGTGGCG GCCTATCCTG AAGTGCACCC GGATGCGCCC
AATGCCCAGG CGGATCTGAT TAATCTTAAG AAGAAGATAG ACGCGGGGGC CAACCGCGCC
ATCACCCAGT TCTTCTTCGA TGTGGAGTCT TACCTGAGAT TCAGAGACCG CTGCGTGGCC
GCCGGTATCG ACGTGGAGAT AGTGCCGGGC ATACTGCCAG TGACCAACTT TACTCAGCTG
AAACGTTTCG CCGGCATGAC CAATGTGTCT ATCCCAAGCT GGCTGCATAA GCAGTTTGAA
GGGCTCGACG ATGACCCGTC GACCCGCCAG ATGGTAGGGG CCAACGTGGC CATCGACATG
GTCAAGGTGT TGTCTCGTGA AGGGGTGAAA GACTTCCACT TCTATACCCT GAACCGCGCC
GAATTAACCT ATGCCATCTG CCATACCCTT GGCGTAAGAC CCGGTAAATA G
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| Protein sequence | MAFHHAQHAN SLNQSLSELN GDINVSFEFF PPATPEMETI LWNSIRRLEP LKPKFVSVTY
GANSGVRDRT HGVIERIQKE TDLVAAPHLT LVDASDEELV ELAKHYWNSG IRDIVALRGD
LPAGSPKPTR FANDLVRLLK SVADFDISVA AYPEVHPDAP NAQADLINLK KKIDAGANRA
ITQFFFDVES YLRFRDRCVA AGIDVEIVPG ILPVTNFTQL KRFAGMTNVS IPSWLHKQFE
GLDDDPSTRQ MVGANVAIDM VKVLSREGVK DFHFYTLNRA ELTYAICHTL GVRPGK
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