| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0517 |
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| Symbol | |
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| ID | 4923714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 586558 |
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| End bp | 587754 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162046 |
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| Product | putative plasmid transfer protein |
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| Protein accession | YP_001092648 |
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| Protein GI | 127511451 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.359059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATACC TTAGCTTGGT CATCGCAGTG TTATTGTCTG GTAGTGCCTC ACTGGCATCT
GCCGCCTCCC TCTACAACGA AGCCCGTAGT GATGCCATGG GCGGAACCGG GGTCGCGGCC
TCTAACCGCG AAGGTGCCGC CTTTATCAAC CCCGCCCTGT TAGCCATTCA TGCCCCCAAG
TATTCCGGCG GCGCCGTGAT GTTGCCCGTG CTGGGCGCCG AGGCTGCGAA TATCGATAAT
CTGACCGACA AATTCGACGC CCTGCAGGCC TCCTATGACG GTTTGGAGGC GGCCATCAAT
GCCAGCGACG TCACTGGGAT CACCAATTAC CGCGACATGC TGGTCGCCGA TCTTAAGTCC
CTCGATGGTG AAAATGCCTA TGGCAGTGTG GGGCTAGGTT TTTCCGTGGT CCTGCCCACC
AAGCGCATGC CCATGTCGAT CTTTTACAAG ACCTATATCG ATGCGGTGAG CGTGGCGGTG
ATCGAGGACA GCGACATAGA CGCCCTGACC AATCTCGACC CTAACAATCC GCCTGCGGTC
ACTGATCTGG ATTCGCAGGG GGCCGTGGTC GCCGGTGCCA TCTCAGATCT TGGTGTGGCC
CTCAGCTTCC CGCTGTCGAT CGTCAACATG CCGGTCGCTG TCGGTATCTC GCCCAAGCTG
CAGCGCATAG ACACCTATAA CTATGTGGTC AGTGCCAACA ACTTCGATGC CGATGATTTC
GACGACAACA AATACCGCAA CGACGATACC GTGGCAAACC TGGATATCGG CGTGGCCATT
CAGCCACTCG AACGCATGAC CATAGGCCTG TCGGGACGTA ACCTGGTGAG CCAGAAGCTG
GACACAGTCG AGGCGATGGG GCGCAAGTTT ACCTATCGTG TCGAGGCTCT CTATACCTTA
GGTGTGGCTT ATGATTGGGA TAACTTCAGC CTGACGACAG ATGTGGATCT TAATGGTCAT
AAGCGATTCG ATGAGATAGG CGAGACCCAG TATTGGCGCC TGGGCGGTGA GATGAGGGCG
ACTGATTGGC TGGCCCTGCG TGTCGGCTAT CGCCACGACA TGAAAGATAC CAGCAGTAAT
CTCTATACCC TGGGCACAGG CTTTACCATA GGTCGCTCCT TCAATCTGGA CCTGACCGGC
CTGGTGGGCA CAGATGACGC CGTGGGTGGG GTGATTCAGA CTTCCTATCA TTTCTAG
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| Protein sequence | MKYLSLVIAV LLSGSASLAS AASLYNEARS DAMGGTGVAA SNREGAAFIN PALLAIHAPK
YSGGAVMLPV LGAEAANIDN LTDKFDALQA SYDGLEAAIN ASDVTGITNY RDMLVADLKS
LDGENAYGSV GLGFSVVLPT KRMPMSIFYK TYIDAVSVAV IEDSDIDALT NLDPNNPPAV
TDLDSQGAVV AGAISDLGVA LSFPLSIVNM PVAVGISPKL QRIDTYNYVV SANNFDADDF
DDNKYRNDDT VANLDIGVAI QPLERMTIGL SGRNLVSQKL DTVEAMGRKF TYRVEALYTL
GVAYDWDNFS LTTDVDLNGH KRFDEIGETQ YWRLGGEMRA TDWLALRVGY RHDMKDTSSN
LYTLGTGFTI GRSFNLDLTG LVGTDDAVGG VIQTSYHF
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