Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0422 |
Symbol | |
ID | 4922978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 475572 |
End bp | 476057 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640161951 |
Product | hypothetical protein |
Protein accession | YP_001092553 |
Protein GI | 127511356 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTCCCC TTATCGACTG CCTCCTCATC GGCCTGGGCG CCACCCTGAT CATGGATCTT TGGGGCCTGG TGCGTCATCC CCTGCTGGGT ATGCCGCTGC CAAGCTATTA TCTGGTGGGC CGCTGGCTGG GCCACATGCC CAAAGGGCAG TTTCGTCACC AAGCGATAGC AAAGGCCTCC CCAGTCCCGG GTGAGACCCT CATAGGTTGG TTGGCCCACT ATCTCATCGG CGTTAGCTTT GCCGCCCTTT TGCTGCTCAT TACCGGCTCA AAATGGCTCA CCAGCCCAAG CCTGACCCCC GCCCTCGCGG TGGGCTTAGT CACTGTGCTC GCCCCCTTCT TGCTGATGCA ACCCGGCATG GGCGCAGGCA TCGCCGCCTC ACGTCTGCCC AACCCCGGCC AGGCACGGCT ACACAGCCTG ATCACCCATG GCGTATTCGG GCTCGGCCTC TACCTCTCGG CGCTAGGCCT CCGACTCTTT AACTGA
|
Protein sequence | MSPLIDCLLI GLGATLIMDL WGLVRHPLLG MPLPSYYLVG RWLGHMPKGQ FRHQAIAKAS PVPGETLIGW LAHYLIGVSF AALLLLITGS KWLTSPSLTP ALAVGLVTVL APFLLMQPGM GAGIAASRLP NPGQARLHSL ITHGVFGLGL YLSALGLRLF N
|
| |