Gene Shew_0422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0422 
Symbol 
ID4922978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp475572 
End bp476057 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content62% 
IMG OID640161951 
Producthypothetical protein 
Protein accessionYP_001092553 
Protein GI127511356 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCCCC TTATCGACTG CCTCCTCATC GGCCTGGGCG CCACCCTGAT CATGGATCTT 
TGGGGCCTGG TGCGTCATCC CCTGCTGGGT ATGCCGCTGC CAAGCTATTA TCTGGTGGGC
CGCTGGCTGG GCCACATGCC CAAAGGGCAG TTTCGTCACC AAGCGATAGC AAAGGCCTCC
CCAGTCCCGG GTGAGACCCT CATAGGTTGG TTGGCCCACT ATCTCATCGG CGTTAGCTTT
GCCGCCCTTT TGCTGCTCAT TACCGGCTCA AAATGGCTCA CCAGCCCAAG CCTGACCCCC
GCCCTCGCGG TGGGCTTAGT CACTGTGCTC GCCCCCTTCT TGCTGATGCA ACCCGGCATG
GGCGCAGGCA TCGCCGCCTC ACGTCTGCCC AACCCCGGCC AGGCACGGCT ACACAGCCTG
ATCACCCATG GCGTATTCGG GCTCGGCCTC TACCTCTCGG CGCTAGGCCT CCGACTCTTT
AACTGA
 
Protein sequence
MSPLIDCLLI GLGATLIMDL WGLVRHPLLG MPLPSYYLVG RWLGHMPKGQ FRHQAIAKAS 
PVPGETLIGW LAHYLIGVSF AALLLLITGS KWLTSPSLTP ALAVGLVTVL APFLLMQPGM
GAGIAASRLP NPGQARLHSL ITHGVFGLGL YLSALGLRLF N