| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0419 |
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| Symbol | |
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| ID | 4924341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 472828 |
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| End bp | 473838 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640161948 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | YP_001092550 |
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| Protein GI | 127511353 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATCA AAGTGGGAAT TAACGGCTTT GGCCGCATGG GACGCCTGGC GCTGCGCGCC
GCTTGGGAGT GGGACGATAT CGAGTTTGTG CAGATCAACG ACCCGGCGGG CGATGCCGCC
ACCCTGGCGC ATCTGCTGAC CTTCGACTCC ATCCATGGCC GCTGGAACCA TGATGCCGTC
GCCGAGGGCG AGCAGATCAT CATAGGTGAC AAGCGCATCA ACACCAGTGC CAACCGCGCC
ATCGGCGACA CCGATTGGTC TGGCTGTGAC CTGGTGATCG AGGCCTCAGG GGTGATGAAG
ACTAAGGCGC TGCTGCAGGC CTATCTGGAT CAAGGCGTGA AGCGTGTGGT GGTGACCGCG
CCGGTGAAGG AAGAGGGCGT ACTTAACATC GTCATGGGGG TTAACCATCA GCTGTATGAT
AAGGACAAAT ATCCTATCGT CACCGCGGCA TCCTGCACTA CCAACTGTCT GGCGCCTGTG
GTGAAGGTGC TGCACGAGCA GATCGGCATC AAGCATGGCT CCATGACGAC CATTCACGAC
ATCACCAATA CTCAGACCAT CTTAGATGCG CCCCATAAGG ATCTGCGCCG TGCCCGCGCC
TGCGGCCAGT CACTGATCCC CACCACCACG GGCTCGGCTA CTGCAATTAC CCACATCTTC
CCCGAGCTGA AGGGTAAGTT AAACGGCCAT GCGGTGCGTG TGCCCCTGGC AAATGCTTCC
ATCACAGACT GTGTGTTTGA GATGCAACGC CCGGTGACCG AGCAGGAGGT CAACGCCCTG
TTTAAGGCGG CTGCCGAAGG TGAACTTAAA GATATTCTCG GCTACGAGGA GCGCCCGCTG
GTCTCTGTGG ATTACAAGAC AGATCCCCGC TCCAGCATAG TCGATGCCCT GTCGACCATG
GTGATCAACG GCACTCAACT CAAGCTCTAC GTCTGGTACG ACAACGAGTG GGGCTATGCC
AACCGCACCG CCGAACTGGC GCGTATGGTC GGCCGCATGG ATAAGGCCTA A
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| Protein sequence | MTIKVGINGF GRMGRLALRA AWEWDDIEFV QINDPAGDAA TLAHLLTFDS IHGRWNHDAV
AEGEQIIIGD KRINTSANRA IGDTDWSGCD LVIEASGVMK TKALLQAYLD QGVKRVVVTA
PVKEEGVLNI VMGVNHQLYD KDKYPIVTAA SCTTNCLAPV VKVLHEQIGI KHGSMTTIHD
ITNTQTILDA PHKDLRRARA CGQSLIPTTT GSATAITHIF PELKGKLNGH AVRVPLANAS
ITDCVFEMQR PVTEQEVNAL FKAAAEGELK DILGYEERPL VSVDYKTDPR SSIVDALSTM
VINGTQLKLY VWYDNEWGYA NRTAELARMV GRMDKA
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