| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0386 |
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| Symbol | |
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| ID | 4923176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 437133 |
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| End bp | 437738 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640161915 |
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| Product | fimbrial assembly family protein |
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| Protein accession | YP_001092517 |
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| Protein GI | 127511320 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCAA AACTGCGGGT CAATCTCTTT ACTGCCAGCC TGTTACCGCC TAGGTTGCGC
CTCTCCTTTA GGCGCCTACT ACAGCTAGGC TTCGGCCTAT TTGTCTTGCT GCTGGCCGCG
AACCTACTGG CCTATCTGCA TCTGGGAAGC CTGGAGGCCG ACAAGCATCA GCTACTCAGC
GATAAGGCCG CTTTCGATCA ACAGAAGGCG CAGCTCGAGC AGGCCATCGC CAAGCGCAGC
GCCTCTCAGG CACTGGTGCA GCAGGTGGAT CTCCTATCGC AGCAGGTGGA ACTCAAGCGT
CTGCTACTCG GCGAACTCTC CCATGTGGAG ACCCTCACCA GCAAGGGCTA TTCGCCCCTG
CTGACCGGAC TTGCGCGGGT GACCGACGAT CAGCTCTGGC TGAGTCGTAT CCAGGTGCAG
GAAGATCAGT TTGTCTTCGA GGGCTTTAGC GCCGCGCCGA ATGCTGTCCC CCTCTGGCTG
GCCCGCCTGC AAGGGGTCGA GCCGCTCAAG GGGCAGACCT TTAGCACGCT CACCATGAAC
CGGGGCGAAA AGCAGCCGCT GGGATTTGTG CTGCGCAGCA AGCGTGATGA GGAGCAGGCG
AAATGA
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| Protein sequence | MNPKLRVNLF TASLLPPRLR LSFRRLLQLG FGLFVLLLAA NLLAYLHLGS LEADKHQLLS
DKAAFDQQKA QLEQAIAKRS ASQALVQQVD LLSQQVELKR LLLGELSHVE TLTSKGYSPL
LTGLARVTDD QLWLSRIQVQ EDQFVFEGFS AAPNAVPLWL ARLQGVEPLK GQTFSTLTMN
RGEKQPLGFV LRSKRDEEQA K
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