Gene Shew_0290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0290 
SymbolilvM 
ID4920590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp310213 
End bp310482 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content57% 
IMG OID640161814 
Productacetolactate synthase 2 regulatory subunit 
Protein accessionYP_001092421 
Protein GI127511224 
COG category[S] Function unknown 
COG ID[COG3978] Acetolactate synthase (isozyme II), small (regulatory) subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTATA ACCTAGCCTT AACCTTAGCC CAGCAACCCG AGGTGATAGA ACGTGTCCTG 
CGAGTCACAC GTCACCGTGG ATTTAAGGTC ACAGAGATGG ATATGCACCT GGGTGACAAT
GGTACCACCC GGCTCGGCAT GGTGGTGGAG AGCGAGCGCG CGCTCGAGCT TCTGAGCCAT
CAGCTGAACA AACTGATCGA TGTCACCGAG TGCGAGGTCC TTTCGGCCAA GCCCGCCGCG
ACAAGATACC CCCAACACGC AAGCGCCTAA
 
Protein sequence
MIYNLALTLA QQPEVIERVL RVTRHRGFKV TEMDMHLGDN GTTRLGMVVE SERALELLSH 
QLNKLIDVTE CEVLSAKPAA TRYPQHASA