| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0286 |
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| Symbol | |
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| ID | 4920627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 304599 |
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| End bp | 305408 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640161810 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001092417 |
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| Protein GI | 127511220 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.126336 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGTCAT GGGGACGCTT GGTCACTGGC TTATGCTGTG GCTTCGCCTT GTTATTCTCG
GCCCTTCCCG CCCTGGCCAC GGCCTCTGTC ACCATATGCG TCGAAAACAC CGAGTTTCCT
CCCTTTAACT ATTTCGACCG TAACCAGAGC GTGGAGCCCC GCAGCATAGG CTACGACATC
GACATACTCA ACCTTGCCTT CGGTCAGAGC GTGCTGAGCC ATAAAGTGAT TGCCCTGCCC
TGGAATCGTT GCCTGAAAGA GGTCAAACAG GGCACGGTCG ATGCGGCCAT GAGCGCGTCG
CTCAACAGCG AGCGCCGTCG CGACTATCTG ATCTCCACCC CCTACTATTA TCTGACCCCC
AGCTACTACT ATCTCAAGTC AGACTTTCCC AAGGGGGTAG AGGTGCAGCG CCTCGAAGAG
CTCAACCACT ACGGCAGCGT GTGCGGCATC AAGAACTTCA ACTATGAAAA CTTCGGCCTT
AAGCCCGACT TTCACCTGTT TCAGATCCGC AGCCTGGCTC ACCTGCCCGA GATGCTCACC
AAGAAGCGCT GCCAGTTCTT CCTCGCCCGC AAGGAGACAC TCAGCGGCAC CTTGGCCATC
AACAAGATGG AAGACTTCTA CACCAGGCTT GCCGGCATCA CAGCCCCCAA CGCCAAGCCA
GAACCCTTCT ATATGCTGAT CTCGAAGAAC TCGCCCCACA AAGAGACCAT CAAGCAGCTG
TTCGATGCCA AGGTCGACAG CCTCAACAAA CAGGGCAAGT TACGCCCCCT GCTCGAGCAT
CACCTGCAGC TACTGAGTCA AACCTATTGA
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| Protein sequence | MVSWGRLVTG LCCGFALLFS ALPALATASV TICVENTEFP PFNYFDRNQS VEPRSIGYDI
DILNLAFGQS VLSHKVIALP WNRCLKEVKQ GTVDAAMSAS LNSERRRDYL ISTPYYYLTP
SYYYLKSDFP KGVEVQRLEE LNHYGSVCGI KNFNYENFGL KPDFHLFQIR SLAHLPEMLT
KKRCQFFLAR KETLSGTLAI NKMEDFYTRL AGITAPNAKP EPFYMLISKN SPHKETIKQL
FDAKVDSLNK QGKLRPLLEH HLQLLSQTY
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